Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfc4Q99J62 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfc4Q99J62 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfc4Q99J62 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rfc4Q99J62 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.4■□□□□ 0.22
Rfc4Q99J62 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfc4Q99J62 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rfc4Q99J62 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfc4Q99J62 Gm12882-201ENSMUST00000121696 517 ntBASIC16.4■□□□□ 0.22
Rfc4Q99J62 Mir1982-201ENSMUST00000157368 74 ntBASIC16.4■□□□□ 0.22
Rfc4Q99J62 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC16.4■□□□□ 0.22
Rfc4Q99J62 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rfc4Q99J62 AC166349.1-201ENSMUST00000220866 695 ntBASIC16.4■□□□□ 0.22
Rfc4Q99J62 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfc4Q99J62 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.4■□□□□ 0.22
Rfc4Q99J62 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rfc4Q99J62 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.4■□□□□ 0.22
Rfc4Q99J62 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rfc4Q99J62 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfc4Q99J62 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC16.4■□□□□ 0.22
Rfc4Q99J62 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rfc4Q99J62 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfc4Q99J62 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfc4Q99J62 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rfc4Q99J62 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rfc4Q99J62 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rfc4Q99J62 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfc4Q99J62 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rfc4Q99J62 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfc4Q99J62 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfc4Q99J62 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfc4Q99J62 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.39■□□□□ 0.21
Rfc4Q99J62 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Rfc4Q99J62 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfc4Q99J62 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfc4Q99J62 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfc4Q99J62 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfc4Q99J62 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.39■□□□□ 0.21
Rfc4Q99J62 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfc4Q99J62 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rfc4Q99J62 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rfc4Q99J62 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rfc4Q99J62 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.39■□□□□ 0.21
Rfc4Q99J62 Gm5425-201ENSMUST00000214125 459 ntBASIC16.39■□□□□ 0.21
Rfc4Q99J62 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rfc4Q99J62 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Rfc4Q99J62 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfc4Q99J62 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfc4Q99J62 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfc4Q99J62 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfc4Q99J62 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfc4Q99J62 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfc4Q99J62 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfc4Q99J62 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfc4Q99J62 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfc4Q99J62 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfc4Q99J62 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rfc4Q99J62 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfc4Q99J62 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfc4Q99J62 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Rfc4Q99J62 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.38■□□□□ 0.21
Rfc4Q99J62 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfc4Q99J62 Gm12742-201ENSMUST00000117326 410 ntBASIC16.38■□□□□ 0.21
Rfc4Q99J62 Gm15957-201ENSMUST00000118893 974 ntBASIC16.38■□□□□ 0.21
Rfc4Q99J62 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC16.38■□□□□ 0.21
Rfc4Q99J62 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfc4Q99J62 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfc4Q99J62 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfc4Q99J62 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC16.38■□□□□ 0.21
Rfc4Q99J62 Mir6420-201ENSMUST00000185032 102 ntBASIC16.38■□□□□ 0.21
Rfc4Q99J62 Gm17794-201ENSMUST00000220252 955 ntBASIC16.38■□□□□ 0.21
Rfc4Q99J62 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rfc4Q99J62 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfc4Q99J62 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfc4Q99J62 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfc4Q99J62 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfc4Q99J62 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.38■□□□□ 0.21
Rfc4Q99J62 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rfc4Q99J62 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfc4Q99J62 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rfc4Q99J62 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfc4Q99J62 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfc4Q99J62 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.38■□□□□ 0.21
Rfc4Q99J62 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfc4Q99J62 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rfc4Q99J62 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfc4Q99J62 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Rfc4Q99J62 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfc4Q99J62 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rfc4Q99J62 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms