Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb1Q91Y08 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Gm43474-201ENSMUST00000196415 774 ntBASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb1Q91Y08 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhb1Q91Y08 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhb1Q91Y08 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.83□□□□□ -0.03
Pcdhb1Q91Y08 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
Pcdhb1Q91Y08 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhb1Q91Y08 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhb1Q91Y08 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhb1Q91Y08 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm22065-201ENSMUST00000103753 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm22066-201ENSMUST00000103761 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm24932-201ENSMUST00000103763 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm24115-201ENSMUST00000103799 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm22190-201ENSMUST00000103827 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm22191-201ENSMUST00000103831 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm24721-201ENSMUST00000103849 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm28018-201ENSMUST00000103869 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm26399-201ENSMUST00000103937 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm13823-201ENSMUST00000119930 345 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm6222-201ENSMUST00000120787 396 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm25349-201ENSMUST00000177728 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm23616-201ENSMUST00000177797 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm25871-201ENSMUST00000177816 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm24752-201ENSMUST00000178240 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm24496-201ENSMUST00000178287 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm25649-201ENSMUST00000178476 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm25548-201ENSMUST00000178681 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm23147-201ENSMUST00000178841 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm26095-201ENSMUST00000179270 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm22171-201ENSMUST00000179283 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm23936-201ENSMUST00000179354 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm22619-201ENSMUST00000179516 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm25255-201ENSMUST00000179579 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm24755-201ENSMUST00000179691 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm26506-201ENSMUST00000179692 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm25086-201ENSMUST00000179931 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm23243-201ENSMUST00000180047 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm24659-201ENSMUST00000180212 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm24169-201ENSMUST00000180244 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm23689-201ENSMUST00000180354 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm27359-201ENSMUST00000184153 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm27785-201ENSMUST00000184268 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm27466-201ENSMUST00000184396 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Gm27703-201ENSMUST00000184836 110 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Chchd1-203ENSMUST00000224633 557 ntBASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb1Q91Y08 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms