Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb2Q91Y00 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Gm27533-201ENSMUST00000183800 152 ntBASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb2Q91Y00 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 Gm38294-201ENSMUST00000192831 381 ntBASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb2Q91Y00 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Gm13223-201ENSMUST00000118609 747 ntBASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Mir1897-201ENSMUST00000122581 272 ntBASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Gm44344-201ENSMUST00000200287 129 ntBASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Dupd1-202ENSMUST00000224735 548 ntBASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms