Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 Gm6888-201ENSMUST00000221983 706 ntBASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Gm13223-201ENSMUST00000118609 747 ntBASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Gm14767-201ENSMUST00000121559 586 ntBASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Gm27680-201ENSMUST00000184192 160 ntBASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Gm6916-202ENSMUST00000205523 195 ntBASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb22Q91XZ8 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb22Q91XZ8 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb22Q91XZ8 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb22Q91XZ8 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb22Q91XZ8 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.64■□□□□ 0.25
Pcdhb22Q91XZ8 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb22Q91XZ8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb22Q91XZ8 Gm13453-201ENSMUST00000118708 357 ntBASIC16.64■□□□□ 0.25
Pcdhb22Q91XZ8 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.64■□□□□ 0.25
Pcdhb22Q91XZ8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb22Q91XZ8 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb22Q91XZ8 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.64■□□□□ 0.25
Pcdhb22Q91XZ8 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.64■□□□□ 0.25
Pcdhb22Q91XZ8 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb22Q91XZ8 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pcdhb22Q91XZ8 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb22Q91XZ8 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb22Q91XZ8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb22Q91XZ8 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb22Q91XZ8 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb22Q91XZ8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pcdhb22Q91XZ8 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb22Q91XZ8 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb22Q91XZ8 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb22Q91XZ8 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb22Q91XZ8 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb22Q91XZ8 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb22Q91XZ8 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb22Q91XZ8 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb22Q91XZ8 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Pcdhb22Q91XZ8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb22Q91XZ8 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Pcdhb22Q91XZ8 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.63■□□□□ 0.25
Pcdhb22Q91XZ8 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb22Q91XZ8 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb22Q91XZ8 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb22Q91XZ8 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.63■□□□□ 0.25
Pcdhb22Q91XZ8 Gm8584-201ENSMUST00000171982 758 ntBASIC16.63■□□□□ 0.25
Pcdhb22Q91XZ8 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdhb22Q91XZ8 Gm17837-201ENSMUST00000186435 985 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms