Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 Gm45453-201ENSMUST00000211758 853 ntBASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb6Q91XZ4 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Gm37935-201ENSMUST00000192012 982 ntBASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb6Q91XZ4 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Gm23935-201ENSMUST00000102303 57 ntBASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Gm24270-201ENSMUST00000102326 57 ntBASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Gm24245-201ENSMUST00000157318 57 ntBASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Gm9719-201ENSMUST00000162765 543 ntBASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Gm6736-201ENSMUST00000166583 948 ntBASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Gm5312-201ENSMUST00000203728 547 ntBASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms