Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Gm17271-201ENSMUST00000165535 355 ntBASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Gm45747-201ENSMUST00000212203 999 ntBASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhga11Q91XY8 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Gm9385-201ENSMUST00000117563 472 ntBASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Gm5479-201ENSMUST00000160578 435 ntBASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Gm17968-201ENSMUST00000194902 784 ntBASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhga11Q91XY8 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms