Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
StrcQ8VIM6 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC16.61■□□□□ 0.25
StrcQ8VIM6 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
StrcQ8VIM6 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
StrcQ8VIM6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
StrcQ8VIM6 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
StrcQ8VIM6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
StrcQ8VIM6 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
StrcQ8VIM6 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
StrcQ8VIM6 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
StrcQ8VIM6 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
StrcQ8VIM6 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
StrcQ8VIM6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
StrcQ8VIM6 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
StrcQ8VIM6 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC16.61■□□□□ 0.25
StrcQ8VIM6 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
StrcQ8VIM6 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
StrcQ8VIM6 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
StrcQ8VIM6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
StrcQ8VIM6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
StrcQ8VIM6 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
StrcQ8VIM6 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
StrcQ8VIM6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
StrcQ8VIM6 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
StrcQ8VIM6 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
StrcQ8VIM6 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
StrcQ8VIM6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
StrcQ8VIM6 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
StrcQ8VIM6 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
StrcQ8VIM6 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
StrcQ8VIM6 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC16.6■□□□□ 0.25
StrcQ8VIM6 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC16.6■□□□□ 0.25
StrcQ8VIM6 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC16.6■□□□□ 0.25
StrcQ8VIM6 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
StrcQ8VIM6 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC16.6■□□□□ 0.25
StrcQ8VIM6 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.6■□□□□ 0.25
StrcQ8VIM6 AC134254.1-201ENSMUST00000221362 167 ntBASIC16.6■□□□□ 0.25
StrcQ8VIM6 Nsd1-205ENSMUST00000224693 852 ntBASIC16.6■□□□□ 0.25
StrcQ8VIM6 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
StrcQ8VIM6 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
StrcQ8VIM6 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC16.6■□□□□ 0.25
StrcQ8VIM6 Gm6015-201ENSMUST00000217493 1586 ntBASIC16.6■□□□□ 0.25
StrcQ8VIM6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
StrcQ8VIM6 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC16.6■□□□□ 0.25
StrcQ8VIM6 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
StrcQ8VIM6 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.6■□□□□ 0.25
StrcQ8VIM6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
StrcQ8VIM6 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.6■□□□□ 0.25
StrcQ8VIM6 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
StrcQ8VIM6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
StrcQ8VIM6 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
StrcQ8VIM6 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
StrcQ8VIM6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
StrcQ8VIM6 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.59■□□□□ 0.25
StrcQ8VIM6 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
StrcQ8VIM6 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC16.59■□□□□ 0.25
StrcQ8VIM6 Gm12363-201ENSMUST00000122250 668 ntBASIC16.59■□□□□ 0.25
StrcQ8VIM6 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
StrcQ8VIM6 Gm16505-201ENSMUST00000179981 232 ntBASIC16.59■□□□□ 0.25
StrcQ8VIM6 Gm5896-201ENSMUST00000189662 1024 ntBASIC16.59■□□□□ 0.25
StrcQ8VIM6 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC16.59■□□□□ 0.25
StrcQ8VIM6 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC16.59■□□□□ 0.25
StrcQ8VIM6 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC16.59■□□□□ 0.25
StrcQ8VIM6 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
StrcQ8VIM6 AC022775.2-201ENSMUST00000227885 646 ntBASIC16.59■□□□□ 0.25
StrcQ8VIM6 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
StrcQ8VIM6 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
StrcQ8VIM6 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
StrcQ8VIM6 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
StrcQ8VIM6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
StrcQ8VIM6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.59■□□□□ 0.25
StrcQ8VIM6 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC16.59■□□□□ 0.25
StrcQ8VIM6 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
StrcQ8VIM6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
StrcQ8VIM6 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
StrcQ8VIM6 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
StrcQ8VIM6 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
StrcQ8VIM6 Gm4819-201ENSMUST00000182170 1009 ntBASIC16.59■□□□□ 0.25
StrcQ8VIM6 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC16.59■□□□□ 0.25
StrcQ8VIM6 Gm43138-201ENSMUST00000199123 708 ntBASIC16.59■□□□□ 0.25
StrcQ8VIM6 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
StrcQ8VIM6 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
StrcQ8VIM6 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
StrcQ8VIM6 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
StrcQ8VIM6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.58■□□□□ 0.24
StrcQ8VIM6 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
StrcQ8VIM6 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC16.58■□□□□ 0.24
StrcQ8VIM6 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC16.58■□□□□ 0.24
StrcQ8VIM6 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC16.58■□□□□ 0.24
StrcQ8VIM6 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC16.58■□□□□ 0.24
StrcQ8VIM6 Gm25732-201ENSMUST00000175168 60 ntBASIC16.58■□□□□ 0.24
StrcQ8VIM6 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC16.58■□□□□ 0.24
StrcQ8VIM6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
StrcQ8VIM6 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
StrcQ8VIM6 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
StrcQ8VIM6 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
StrcQ8VIM6 Gm43579-201ENSMUST00000202387 1307 ntBASIC16.58■□□□□ 0.24
StrcQ8VIM6 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC16.58■□□□□ 0.24
StrcQ8VIM6 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
StrcQ8VIM6 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms