Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim60Q8VI40 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trim60Q8VI40 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Trim60Q8VI40 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim60Q8VI40 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim60Q8VI40 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
Trim60Q8VI40 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim60Q8VI40 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim60Q8VI40 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Trim60Q8VI40 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim60Q8VI40 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim60Q8VI40 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim60Q8VI40 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim60Q8VI40 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim60Q8VI40 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Trim60Q8VI40 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim60Q8VI40 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim60Q8VI40 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim60Q8VI40 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
Trim60Q8VI40 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim60Q8VI40 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.78□□□□□ -0.04
Trim60Q8VI40 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim60Q8VI40 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim60Q8VI40 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim60Q8VI40 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.78□□□□□ -0.04
Trim60Q8VI40 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim60Q8VI40 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.77□□□□□ -0.04
Trim60Q8VI40 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim60Q8VI40 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim60Q8VI40 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.77□□□□□ -0.04
Trim60Q8VI40 Gm14140-201ENSMUST00000119999 995 ntBASIC14.77□□□□□ -0.05
Trim60Q8VI40 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim60Q8VI40 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim60Q8VI40 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.77□□□□□ -0.05
Trim60Q8VI40 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.77□□□□□ -0.05
Trim60Q8VI40 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.77□□□□□ -0.05
Trim60Q8VI40 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.77□□□□□ -0.05
Trim60Q8VI40 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim60Q8VI40 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim60Q8VI40 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim60Q8VI40 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trim60Q8VI40 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.77□□□□□ -0.05
Trim60Q8VI40 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Trim60Q8VI40 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim60Q8VI40 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim60Q8VI40 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim60Q8VI40 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim60Q8VI40 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim60Q8VI40 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim60Q8VI40 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim60Q8VI40 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
Trim60Q8VI40 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim60Q8VI40 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim60Q8VI40 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim60Q8VI40 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim60Q8VI40 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim60Q8VI40 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim60Q8VI40 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trim60Q8VI40 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.76□□□□□ -0.05
Trim60Q8VI40 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim60Q8VI40 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim60Q8VI40 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.76□□□□□ -0.05
Trim60Q8VI40 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim60Q8VI40 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim60Q8VI40 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim60Q8VI40 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim60Q8VI40 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim60Q8VI40 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim60Q8VI40 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim60Q8VI40 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim60Q8VI40 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.75□□□□□ -0.05
Trim60Q8VI40 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim60Q8VI40 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim60Q8VI40 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim60Q8VI40 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim60Q8VI40 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trim60Q8VI40 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim60Q8VI40 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim60Q8VI40 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim60Q8VI40 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim60Q8VI40 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Trim60Q8VI40 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.75□□□□□ -0.05
Trim60Q8VI40 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim60Q8VI40 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.75□□□□□ -0.05
Trim60Q8VI40 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.75□□□□□ -0.05
Trim60Q8VI40 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim60Q8VI40 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim60Q8VI40 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim60Q8VI40 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim60Q8VI40 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim60Q8VI40 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim60Q8VI40 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim60Q8VI40 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim60Q8VI40 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trim60Q8VI40 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.75□□□□□ -0.05
Trim60Q8VI40 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim60Q8VI40 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trim60Q8VI40 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.75□□□□□ -0.05
Trim60Q8VI40 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim60Q8VI40 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms