Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ndc1Q8VCB1 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ndc1Q8VCB1 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ndc1Q8VCB1 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ndc1Q8VCB1 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ndc1Q8VCB1 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ndc1Q8VCB1 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ndc1Q8VCB1 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ndc1Q8VCB1 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ndc1Q8VCB1 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ndc1Q8VCB1 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ndc1Q8VCB1 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.49□□□□□ -0.25
Ndc1Q8VCB1 Gm27680-201ENSMUST00000184192 160 ntBASIC13.49□□□□□ -0.25
Ndc1Q8VCB1 Shd-206ENSMUST00000225145 998 ntBASIC13.49□□□□□ -0.25
Ndc1Q8VCB1 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ndc1Q8VCB1 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ndc1Q8VCB1 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ndc1Q8VCB1 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ndc1Q8VCB1 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ndc1Q8VCB1 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ndc1Q8VCB1 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Ndc1Q8VCB1 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Gm6222-201ENSMUST00000120787 396 ntBASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Mir1897-201ENSMUST00000122581 272 ntBASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Gm5866-201ENSMUST00000177881 973 ntBASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Gm37230-201ENSMUST00000194491 818 ntBASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Gm7775-201ENSMUST00000218871 853 ntBASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ndc1Q8VCB1 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ndc1Q8VCB1 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ndc1Q8VCB1 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms