Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpap2Q8VC34 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpap2Q8VC34 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rpap2Q8VC34 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpap2Q8VC34 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.68■□□□□ 0.1
Rpap2Q8VC34 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rpap2Q8VC34 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpap2Q8VC34 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rpap2Q8VC34 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rpap2Q8VC34 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpap2Q8VC34 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpap2Q8VC34 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpap2Q8VC34 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Rpap2Q8VC34 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.67■□□□□ 0.1
Rpap2Q8VC34 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpap2Q8VC34 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Rpap2Q8VC34 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.67■□□□□ 0.1
Rpap2Q8VC34 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpap2Q8VC34 Gm25948-201ENSMUST00000175334 112 ntBASIC15.67■□□□□ 0.1
Rpap2Q8VC34 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.67■□□□□ 0.1
Rpap2Q8VC34 Gm27430-201ENSMUST00000184585 107 ntBASIC15.67■□□□□ 0.1
Rpap2Q8VC34 Gm44333-201ENSMUST00000197168 107 ntBASIC15.67■□□□□ 0.1
Rpap2Q8VC34 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.67■□□□□ 0.1
Rpap2Q8VC34 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.67■□□□□ 0.1
Rpap2Q8VC34 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpap2Q8VC34 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rpap2Q8VC34 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Rpap2Q8VC34 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpap2Q8VC34 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpap2Q8VC34 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpap2Q8VC34 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpap2Q8VC34 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.67■□□□□ 0.1
Rpap2Q8VC34 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpap2Q8VC34 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.67■□□□□ 0.1
Rpap2Q8VC34 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpap2Q8VC34 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpap2Q8VC34 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.66■□□□□ 0.1
Rpap2Q8VC34 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rpap2Q8VC34 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpap2Q8VC34 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.66■□□□□ 0.1
Rpap2Q8VC34 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.66■□□□□ 0.1
Rpap2Q8VC34 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.66■□□□□ 0.1
Rpap2Q8VC34 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpap2Q8VC34 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.66■□□□□ 0.1
Rpap2Q8VC34 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rpap2Q8VC34 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.66■□□□□ 0.1
Rpap2Q8VC34 Mir125a-201ENSMUST00000083545 68 ntBASIC15.66■□□□□ 0.1
Rpap2Q8VC34 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpap2Q8VC34 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpap2Q8VC34 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpap2Q8VC34 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Rpap2Q8VC34 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpap2Q8VC34 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpap2Q8VC34 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpap2Q8VC34 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpap2Q8VC34 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpap2Q8VC34 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpap2Q8VC34 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpap2Q8VC34 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rpap2Q8VC34 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Gm24543-201ENSMUST00000103867 82 ntBASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.65■□□□□ 0.1
Rpap2Q8VC34 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Gm27622-201ENSMUST00000183779 60 ntBASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Gm16476-201ENSMUST00000221544 139 ntBASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpap2Q8VC34 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Rpap2Q8VC34 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rpap2Q8VC34 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.64■□□□□ 0.09
Rpap2Q8VC34 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpap2Q8VC34 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.64■□□□□ 0.09
Rpap2Q8VC34 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpap2Q8VC34 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rpap2Q8VC34 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms