Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc9Q8VC31 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc9Q8VC31 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc9Q8VC31 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc9Q8VC31 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc9Q8VC31 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC17.19■□□□□ 0.34
Ccdc9Q8VC31 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc9Q8VC31 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc9Q8VC31 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc9Q8VC31 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc9Q8VC31 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc9Q8VC31 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc9Q8VC31 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc9Q8VC31 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC17.18■□□□□ 0.34
Ccdc9Q8VC31 Gm37269-201ENSMUST00000193906 1891 ntBASIC17.18■□□□□ 0.34
Ccdc9Q8VC31 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc9Q8VC31 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc9Q8VC31 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc9Q8VC31 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC17.18■□□□□ 0.34
Ccdc9Q8VC31 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc9Q8VC31 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ccdc9Q8VC31 Gm14722-201ENSMUST00000118943 689 ntBASIC17.18■□□□□ 0.34
Ccdc9Q8VC31 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.18■□□□□ 0.34
Ccdc9Q8VC31 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ccdc9Q8VC31 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.18■□□□□ 0.34
Ccdc9Q8VC31 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc9Q8VC31 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC17.18■□□□□ 0.34
Ccdc9Q8VC31 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc9Q8VC31 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc9Q8VC31 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ccdc9Q8VC31 Gm43134-201ENSMUST00000199434 1886 ntBASIC17.18■□□□□ 0.34
Ccdc9Q8VC31 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ccdc9Q8VC31 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
Ccdc9Q8VC31 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc9Q8VC31 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC17.18■□□□□ 0.34
Ccdc9Q8VC31 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC17.17■□□□□ 0.34
Ccdc9Q8VC31 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc9Q8VC31 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc9Q8VC31 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.16■□□□□ 0.34
Ccdc9Q8VC31 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc9Q8VC31 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc9Q8VC31 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ccdc9Q8VC31 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc9Q8VC31 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc9Q8VC31 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Ccdc9Q8VC31 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc9Q8VC31 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.16■□□□□ 0.34
Ccdc9Q8VC31 Gm5587-201ENSMUST00000206270 674 ntBASIC17.16■□□□□ 0.34
Ccdc9Q8VC31 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc9Q8VC31 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.16■□□□□ 0.34
Ccdc9Q8VC31 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc9Q8VC31 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.16■□□□□ 0.34
Ccdc9Q8VC31 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc9Q8VC31 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
Ccdc9Q8VC31 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Ccdc9Q8VC31 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc9Q8VC31 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ccdc9Q8VC31 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc9Q8VC31 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc9Q8VC31 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.15■□□□□ 0.34
Ccdc9Q8VC31 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms