Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Gm10275-202ENSMUST00000168697 495 ntBASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Gm18737-201ENSMUST00000173594 937 ntBASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.31□□□□□ -0.12
Vps39Q8R5L3 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Gm10275-201ENSMUST00000092620 635 ntBASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps39Q8R5L3 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.3□□□□□ -0.12
Vps39Q8R5L3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 Gm6973-201ENSMUST00000117080 721 ntBASIC14.3□□□□□ -0.12
Vps39Q8R5L3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 Gm18206-201ENSMUST00000207027 926 ntBASIC14.3□□□□□ -0.12
Vps39Q8R5L3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps39Q8R5L3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms