Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cd109Q8R422 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cd109Q8R422 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Cd109Q8R422 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cd109Q8R422 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cd109Q8R422 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd109Q8R422 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd109Q8R422 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd109Q8R422 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cd109Q8R422 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd109Q8R422 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd109Q8R422 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cd109Q8R422 Gm14730-201ENSMUST00000122378 1045 ntBASIC20.05■□□□□ 0.8
Cd109Q8R422 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC20.05■□□□□ 0.8
Cd109Q8R422 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cd109Q8R422 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cd109Q8R422 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC20.05■□□□□ 0.8
Cd109Q8R422 Gm7498-201ENSMUST00000203282 1084 ntBASIC20.05■□□□□ 0.8
Cd109Q8R422 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC20.05■□□□□ 0.8
Cd109Q8R422 AC131690.1-201ENSMUST00000218406 374 ntBASIC20.05■□□□□ 0.8
Cd109Q8R422 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd109Q8R422 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd109Q8R422 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cd109Q8R422 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd109Q8R422 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd109Q8R422 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cd109Q8R422 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd109Q8R422 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd109Q8R422 Gm37411-201ENSMUST00000194180 2282 ntBASIC20.05■□□□□ 0.8
Cd109Q8R422 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd109Q8R422 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cd109Q8R422 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd109Q8R422 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cd109Q8R422 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd109Q8R422 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC20.04■□□□□ 0.8
Cd109Q8R422 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cd109Q8R422 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC20.04■□□□□ 0.8
Cd109Q8R422 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cd109Q8R422 Gm44981-201ENSMUST00000205549 1943 ntBASIC20.04■□□□□ 0.8
Cd109Q8R422 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cd109Q8R422 Gm8835-201ENSMUST00000173096 1169 ntBASIC20.04■□□□□ 0.8
Cd109Q8R422 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cd109Q8R422 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cd109Q8R422 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Cd109Q8R422 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cd109Q8R422 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cd109Q8R422 Gm37728-201ENSMUST00000195025 2292 ntBASIC20.04■□□□□ 0.8
Cd109Q8R422 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cd109Q8R422 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cd109Q8R422 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cd109Q8R422 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cd109Q8R422 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cd109Q8R422 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cd109Q8R422 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cd109Q8R422 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cd109Q8R422 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd109Q8R422 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd109Q8R422 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd109Q8R422 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC20.03■□□□□ 0.8
Cd109Q8R422 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd109Q8R422 Gm16342-201ENSMUST00000124025 1025 ntBASIC20.03■□□□□ 0.8
Cd109Q8R422 Mir1982-201ENSMUST00000157368 74 ntBASIC20.03■□□□□ 0.8
Cd109Q8R422 Gm8652-201ENSMUST00000181363 964 ntBASIC20.03■□□□□ 0.8
Cd109Q8R422 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cd109Q8R422 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd109Q8R422 AC166997.1-201ENSMUST00000225122 572 ntBASIC20.03■□□□□ 0.8
Cd109Q8R422 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd109Q8R422 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC20.03■□□□□ 0.8
Cd109Q8R422 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd109Q8R422 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Cd109Q8R422 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC20.03■□□□□ 0.8
Cd109Q8R422 Fbxl12-205ENSMUST00000140702 1555 ntBASIC20.03■□□□□ 0.8
Cd109Q8R422 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd109Q8R422 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd109Q8R422 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd109Q8R422 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cd109Q8R422 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Cd109Q8R422 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC20.02■□□□□ 0.8
Cd109Q8R422 Gm11814-201ENSMUST00000119515 929 ntBASIC20.02■□□□□ 0.8
Cd109Q8R422 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cd109Q8R422 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC20.02■□□□□ 0.8
Cd109Q8R422 Gm24196-201ENSMUST00000179161 110 ntBASIC20.02■□□□□ 0.8
Cd109Q8R422 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC20.02■□□□□ 0.8
Cd109Q8R422 Gm3809-201ENSMUST00000180973 1006 ntBASIC20.02■□□□□ 0.8
Cd109Q8R422 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cd109Q8R422 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cd109Q8R422 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cd109Q8R422 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cd109Q8R422 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Cd109Q8R422 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cd109Q8R422 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cd109Q8R422 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC20.02■□□□□ 0.8
Cd109Q8R422 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Cd109Q8R422 Gm43509-201ENSMUST00000196551 2594 ntBASIC20.02■□□□□ 0.8
Cd109Q8R422 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cd109Q8R422 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cd109Q8R422 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
Cd109Q8R422 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cd109Q8R422 Gm27486-201ENSMUST00000184923 80 ntBASIC20.02■□□□□ 0.79
Cd109Q8R422 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms