Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim29Q8R2Q0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.33■□□□□ 0.2
Trim29Q8R2Q0 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim29Q8R2Q0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Trim29Q8R2Q0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trim29Q8R2Q0 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Trim29Q8R2Q0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim29Q8R2Q0 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim29Q8R2Q0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim29Q8R2Q0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim29Q8R2Q0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trim29Q8R2Q0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim29Q8R2Q0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim29Q8R2Q0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trim29Q8R2Q0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim29Q8R2Q0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim29Q8R2Q0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Trim29Q8R2Q0 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim29Q8R2Q0 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
Trim29Q8R2Q0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim29Q8R2Q0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim29Q8R2Q0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim29Q8R2Q0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trim29Q8R2Q0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 Gm2756-201ENSMUST00000195851 400 ntBASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim29Q8R2Q0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Gm13365-201ENSMUST00000121188 973 ntBASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Gm14822-201ENSMUST00000122247 291 ntBASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trim29Q8R2Q0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms