Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp7Q8R1T1 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp7Q8R1T1 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC18.2■□□□□ 0.5
Chmp7Q8R1T1 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC18.2■□□□□ 0.5
Chmp7Q8R1T1 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp7Q8R1T1 AC155729.1-201ENSMUST00000227758 544 ntBASIC18.2■□□□□ 0.5
Chmp7Q8R1T1 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp7Q8R1T1 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Chmp7Q8R1T1 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp7Q8R1T1 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp7Q8R1T1 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Chmp7Q8R1T1 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp7Q8R1T1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp7Q8R1T1 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Mir7085-201ENSMUST00000184353 66 ntBASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 AC156560.2-201ENSMUST00000221232 264 ntBASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 AC139350.3-201ENSMUST00000226151 420 ntBASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp7Q8R1T1 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp7Q8R1T1 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp7Q8R1T1 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Chmp7Q8R1T1 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp7Q8R1T1 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp7Q8R1T1 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp7Q8R1T1 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp7Q8R1T1 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp7Q8R1T1 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp7Q8R1T1 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp7Q8R1T1 Gm15240-201ENSMUST00000118156 720 ntBASIC18.18■□□□□ 0.5
Chmp7Q8R1T1 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp7Q8R1T1 Gm18905-201ENSMUST00000205454 928 ntBASIC18.18■□□□□ 0.5
Chmp7Q8R1T1 Gm7446-201ENSMUST00000221035 1240 ntBASIC18.18■□□□□ 0.5
Chmp7Q8R1T1 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Chmp7Q8R1T1 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp7Q8R1T1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Chmp7Q8R1T1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Chmp7Q8R1T1 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Chmp7Q8R1T1 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp7Q8R1T1 Gm14451-201ENSMUST00000121581 1542 ntBASIC18.18■□□□□ 0.5
Chmp7Q8R1T1 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC18.18■□□□□ 0.5
Chmp7Q8R1T1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp7Q8R1T1 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp7Q8R1T1 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp7Q8R1T1 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp7Q8R1T1 Efs-202ENSMUST00000227037 2540 ntBASIC18.17■□□□□ 0.5
Chmp7Q8R1T1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Chmp7Q8R1T1 Mir692-1-201ENSMUST00000102263 109 ntBASIC18.17■□□□□ 0.5
Chmp7Q8R1T1 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC18.17■□□□□ 0.5
Chmp7Q8R1T1 AC153962.4-201ENSMUST00000217878 242 ntBASIC18.17■□□□□ 0.5
Chmp7Q8R1T1 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Chmp7Q8R1T1 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp7Q8R1T1 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp7Q8R1T1 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp7Q8R1T1 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp7Q8R1T1 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp7Q8R1T1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp7Q8R1T1 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC18.16■□□□□ 0.5
Chmp7Q8R1T1 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Chmp7Q8R1T1 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC18.16■□□□□ 0.5
Chmp7Q8R1T1 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp7Q8R1T1 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC18.16■□□□□ 0.5
Chmp7Q8R1T1 Gm4984-201ENSMUST00000115987 360 ntBASIC18.16■□□□□ 0.5
Chmp7Q8R1T1 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp7Q8R1T1 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC18.16■□□□□ 0.5
Chmp7Q8R1T1 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp7Q8R1T1 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC18.16■□□□□ 0.5
Chmp7Q8R1T1 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Chmp7Q8R1T1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Chmp7Q8R1T1 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC18.16■□□□□ 0.5
Chmp7Q8R1T1 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp7Q8R1T1 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp7Q8R1T1 Gm5356-201ENSMUST00000093326 615 ntBASIC18.16■□□□□ 0.5
Chmp7Q8R1T1 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp7Q8R1T1 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp7Q8R1T1 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp7Q8R1T1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms