Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Sf3a1Q8K4Z5 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3a1Q8K4Z5 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3a1Q8K4Z5 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3a1Q8K4Z5 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3a1Q8K4Z5 Gm8410-201ENSMUST00000117225 605 ntBASIC17.48■□□□□ 0.39
Sf3a1Q8K4Z5 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.48■□□□□ 0.39
Sf3a1Q8K4Z5 Gm27622-201ENSMUST00000183779 60 ntBASIC17.48■□□□□ 0.39
Sf3a1Q8K4Z5 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.48■□□□□ 0.39
Sf3a1Q8K4Z5 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3a1Q8K4Z5 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3a1Q8K4Z5 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Sf3a1Q8K4Z5 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Sf3a1Q8K4Z5 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Sf3a1Q8K4Z5 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3a1Q8K4Z5 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3a1Q8K4Z5 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3a1Q8K4Z5 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sf3a1Q8K4Z5 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Mir6956-201ENSMUST00000183598 62 ntBASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Gm27618-201ENSMUST00000183671 60 ntBASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Gm45453-201ENSMUST00000211758 853 ntBASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Gm45630-201ENSMUST00000210243 1911 ntBASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sf3a1Q8K4Z5 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 Gm12882-201ENSMUST00000121696 517 ntBASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sf3a1Q8K4Z5 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sf3a1Q8K4Z5 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.46■□□□□ 0.38
Sf3a1Q8K4Z5 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sf3a1Q8K4Z5 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sf3a1Q8K4Z5 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sf3a1Q8K4Z5 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Sf3a1Q8K4Z5 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 Gm24543-201ENSMUST00000103867 82 ntBASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 Gm15920-201ENSMUST00000118998 402 ntBASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.45■□□□□ 0.38
Sf3a1Q8K4Z5 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms