Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.49□□□□□ -0.25
Clrn1Q8K445 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn1Q8K445 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn1Q8K445 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Clrn1Q8K445 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn1Q8K445 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.49□□□□□ -0.25
Clrn1Q8K445 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn1Q8K445 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Clrn1Q8K445 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Clrn1Q8K445 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn1Q8K445 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Clrn1Q8K445 Gm26308-201ENSMUST00000157768 69 ntBASIC13.49□□□□□ -0.25
Clrn1Q8K445 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.49□□□□□ -0.25
Clrn1Q8K445 Gm9824-201ENSMUST00000178707 561 ntBASIC13.49□□□□□ -0.25
Clrn1Q8K445 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.49□□□□□ -0.25
Clrn1Q8K445 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn1Q8K445 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn1Q8K445 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Clrn1Q8K445 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn1Q8K445 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.49□□□□□ -0.25
Clrn1Q8K445 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn1Q8K445 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn1Q8K445 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Clrn1Q8K445 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn1Q8K445 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn1Q8K445 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn1Q8K445 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn1Q8K445 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn1Q8K445 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn1Q8K445 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn1Q8K445 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn1Q8K445 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.48□□□□□ -0.25
Clrn1Q8K445 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn1Q8K445 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.48□□□□□ -0.25
Clrn1Q8K445 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn1Q8K445 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn1Q8K445 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn1Q8K445 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn1Q8K445 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn1Q8K445 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn1Q8K445 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn1Q8K445 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Clrn1Q8K445 Gm25287-201ENSMUST00000103846 110 ntBASIC13.48□□□□□ -0.25
Clrn1Q8K445 Gm22918-201ENSMUST00000103855 110 ntBASIC13.48□□□□□ -0.25
Clrn1Q8K445 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.48□□□□□ -0.25
Clrn1Q8K445 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn1Q8K445 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Clrn1Q8K445 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Clrn1Q8K445 Gm10275-202ENSMUST00000168697 495 ntBASIC13.48□□□□□ -0.25
Clrn1Q8K445 Gm24158-201ENSMUST00000175263 71 ntBASIC13.48□□□□□ -0.25
Clrn1Q8K445 Gm18049-201ENSMUST00000208909 581 ntBASIC13.48□□□□□ -0.25
Clrn1Q8K445 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Clrn1Q8K445 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn1Q8K445 Gm10275-201ENSMUST00000092620 635 ntBASIC13.48□□□□□ -0.25
Clrn1Q8K445 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn1Q8K445 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.48□□□□□ -0.25
Clrn1Q8K445 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn1Q8K445 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn1Q8K445 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn1Q8K445 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn1Q8K445 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clrn1Q8K445 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.47□□□□□ -0.25
Clrn1Q8K445 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.47□□□□□ -0.25
Clrn1Q8K445 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clrn1Q8K445 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms