Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cystm1Q8K353 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Gm45053-201ENSMUST00000206112 2499 ntBASIC8.98□□□□□ -0.97
Cystm1Q8K353 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Gm7230-201ENSMUST00000173026 815 ntBASIC8.98□□□□□ -0.97
Cystm1Q8K353 Gm25745-201ENSMUST00000174945 133 ntBASIC8.98□□□□□ -0.97
Cystm1Q8K353 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC8.98□□□□□ -0.97
Cystm1Q8K353 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Gm18041-201ENSMUST00000218210 618 ntBASIC8.98□□□□□ -0.97
Cystm1Q8K353 Gm8655-201ENSMUST00000221159 852 ntBASIC8.98□□□□□ -0.97
Cystm1Q8K353 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Cystm1Q8K353 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Gm26616-202ENSMUST00000195676 3107 ntBASIC8.98□□□□□ -0.97
Cystm1Q8K353 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cystm1Q8K353 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cystm1Q8K353 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cystm1Q8K353 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Cystm1Q8K353 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cystm1Q8K353 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cystm1Q8K353 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Cystm1Q8K353 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cystm1Q8K353 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cystm1Q8K353 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
Cystm1Q8K353 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC8.97□□□□□ -0.97
Cystm1Q8K353 Gm7049-201ENSMUST00000223520 1712 ntBASIC8.97□□□□□ -0.97
Cystm1Q8K353 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cystm1Q8K353 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cystm1Q8K353 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cystm1Q8K353 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Cystm1Q8K353 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC8.97□□□□□ -0.97
Cystm1Q8K353 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Cystm1Q8K353 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cystm1Q8K353 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Cystm1Q8K353 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cystm1Q8K353 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC8.97□□□□□ -0.97
Cystm1Q8K353 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cystm1Q8K353 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC8.97□□□□□ -0.97
Cystm1Q8K353 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cystm1Q8K353 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cystm1Q8K353 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms