Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.89■□□□□ 0.29
Cchcr1Q8K2I2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cchcr1Q8K2I2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cchcr1Q8K2I2 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cchcr1Q8K2I2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cchcr1Q8K2I2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cchcr1Q8K2I2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cchcr1Q8K2I2 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.89■□□□□ 0.29
Cchcr1Q8K2I2 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cchcr1Q8K2I2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cchcr1Q8K2I2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.89■□□□□ 0.29
Cchcr1Q8K2I2 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.89■□□□□ 0.29
Cchcr1Q8K2I2 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cchcr1Q8K2I2 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cchcr1Q8K2I2 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cchcr1Q8K2I2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cchcr1Q8K2I2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cchcr1Q8K2I2 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC16.89■□□□□ 0.29
Cchcr1Q8K2I2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cchcr1Q8K2I2 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cchcr1Q8K2I2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cchcr1Q8K2I2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Gm12882-201ENSMUST00000121696 517 ntBASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Gm18206-201ENSMUST00000207027 926 ntBASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Gm45612-201ENSMUST00000211320 160 ntBASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cchcr1Q8K2I2 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cchcr1Q8K2I2 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cchcr1Q8K2I2 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cchcr1Q8K2I2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Cchcr1Q8K2I2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cchcr1Q8K2I2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cchcr1Q8K2I2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cchcr1Q8K2I2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cchcr1Q8K2I2 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cchcr1Q8K2I2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.86■□□□□ 0.29
Cchcr1Q8K2I2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.86■□□□□ 0.29
Cchcr1Q8K2I2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.86■□□□□ 0.29
Cchcr1Q8K2I2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.86■□□□□ 0.29
Cchcr1Q8K2I2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cchcr1Q8K2I2 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cchcr1Q8K2I2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cchcr1Q8K2I2 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms