Protein–RNA interactions for Protein: Q8K268

Abcf3, ATP-binding cassette sub-family F member 3, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf3Q8K268 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcf3Q8K268 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcf3Q8K268 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcf3Q8K268 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Abcf3Q8K268 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Abcf3Q8K268 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcf3Q8K268 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Abcf3Q8K268 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.34□□□□□ -0.11
Abcf3Q8K268 Gm15358-201ENSMUST00000119249 520 ntBASIC14.34□□□□□ -0.11
Abcf3Q8K268 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcf3Q8K268 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcf3Q8K268 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.34□□□□□ -0.11
Abcf3Q8K268 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcf3Q8K268 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcf3Q8K268 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.34□□□□□ -0.11
Abcf3Q8K268 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Abcf3Q8K268 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcf3Q8K268 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Abcf3Q8K268 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcf3Q8K268 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcf3Q8K268 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
Abcf3Q8K268 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcf3Q8K268 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcf3Q8K268 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcf3Q8K268 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.34□□□□□ -0.11
Abcf3Q8K268 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Abcf3Q8K268 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcf3Q8K268 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcf3Q8K268 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abcf3Q8K268 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Abcf3Q8K268 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Abcf3Q8K268 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Abcf3Q8K268 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Abcf3Q8K268 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Abcf3Q8K268 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Abcf3Q8K268 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Abcf3Q8K268 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Abcf3Q8K268 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Abcf3Q8K268 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.33□□□□□ -0.12
Abcf3Q8K268 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.33□□□□□ -0.12
Abcf3Q8K268 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abcf3Q8K268 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abcf3Q8K268 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abcf3Q8K268 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Abcf3Q8K268 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abcf3Q8K268 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Abcf3Q8K268 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abcf3Q8K268 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.33□□□□□ -0.12
Abcf3Q8K268 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.33□□□□□ -0.12
Abcf3Q8K268 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Abcf3Q8K268 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.33□□□□□ -0.12
Abcf3Q8K268 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abcf3Q8K268 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abcf3Q8K268 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Abcf3Q8K268 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abcf3Q8K268 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Abcf3Q8K268 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Abcf3Q8K268 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abcf3Q8K268 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abcf3Q8K268 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Abcf3Q8K268 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abcf3Q8K268 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abcf3Q8K268 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abcf3Q8K268 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Abcf3Q8K268 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.32□□□□□ -0.12
Abcf3Q8K268 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Abcf3Q8K268 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcf3Q8K268 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcf3Q8K268 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcf3Q8K268 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcf3Q8K268 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Abcf3Q8K268 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcf3Q8K268 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcf3Q8K268 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.32□□□□□ -0.12
Abcf3Q8K268 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcf3Q8K268 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Abcf3Q8K268 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcf3Q8K268 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcf3Q8K268 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.32□□□□□ -0.12
Abcf3Q8K268 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.32□□□□□ -0.12
Abcf3Q8K268 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcf3Q8K268 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.32□□□□□ -0.12
Abcf3Q8K268 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Abcf3Q8K268 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Abcf3Q8K268 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcf3Q8K268 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Abcf3Q8K268 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Abcf3Q8K268 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.32□□□□□ -0.12
Abcf3Q8K268 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Abcf3Q8K268 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Abcf3Q8K268 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abcf3Q8K268 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.32□□□□□ -0.12
Abcf3Q8K268 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Abcf3Q8K268 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms