Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Gm14859-201ENSMUST00000117752 357 ntBASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Gm33142-201ENSMUST00000193913 867 ntBASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cnot3Q8K0V4 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Olfr286-202ENSMUST00000205305 969 ntBASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.4□□□□□ -0.26
Cnot3Q8K0V4 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cnot3Q8K0V4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Gm11764-201ENSMUST00000120221 623 ntBASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Gm8584-201ENSMUST00000171982 758 ntBASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Gm9182-201ENSMUST00000217829 639 ntBASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cnot3Q8K0V4 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms