Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.61□□□□□ -0.07
CopaQ8CIE6 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CopaQ8CIE6 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.61□□□□□ -0.07
CopaQ8CIE6 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
CopaQ8CIE6 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.6□□□□□ -0.07
CopaQ8CIE6 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.6□□□□□ -0.07
CopaQ8CIE6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.6□□□□□ -0.07
CopaQ8CIE6 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CopaQ8CIE6 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.6□□□□□ -0.07
CopaQ8CIE6 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.6□□□□□ -0.07
CopaQ8CIE6 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CopaQ8CIE6 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CopaQ8CIE6 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.59□□□□□ -0.07
CopaQ8CIE6 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CopaQ8CIE6 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.59□□□□□ -0.07
CopaQ8CIE6 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Gm15693-201ENSMUST00000120470 637 ntBASIC14.59□□□□□ -0.07
CopaQ8CIE6 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CopaQ8CIE6 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Gm27622-201ENSMUST00000183779 60 ntBASIC14.59□□□□□ -0.07
CopaQ8CIE6 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.59□□□□□ -0.07
CopaQ8CIE6 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
CopaQ8CIE6 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.58□□□□□ -0.07
CopaQ8CIE6 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
CopaQ8CIE6 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CopaQ8CIE6 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms