Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Gm25990-201ENSMUST00000102440 86 ntBASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tsen54Q8C2A2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Gm11780-201ENSMUST00000136880 516 ntBASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tsen54Q8C2A2 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Tsen54Q8C2A2 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Tsen54Q8C2A2 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Tsen54Q8C2A2 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Tsen54Q8C2A2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Tsen54Q8C2A2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tsen54Q8C2A2 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tsen54Q8C2A2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tsen54Q8C2A2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tsen54Q8C2A2 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Gm6089-201ENSMUST00000197666 938 ntBASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Gm10060-201ENSMUST00000212002 111 ntBASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tsen54Q8C2A2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms