Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps9d1Q8C190 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.4□□□□□ -0.26
Vps9d1Q8C190 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps9d1Q8C190 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vps9d1Q8C190 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Vps9d1Q8C190 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps9d1Q8C190 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps9d1Q8C190 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps9d1Q8C190 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps9d1Q8C190 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Vps9d1Q8C190 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Vps9d1Q8C190 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps9d1Q8C190 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Gm14494-201ENSMUST00000118786 435 ntBASIC13.38□□□□□ -0.27
Vps9d1Q8C190 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Gm9727-201ENSMUST00000161387 555 ntBASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps9d1Q8C190 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms