Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Usp47Q8BY87 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Usp47Q8BY87 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp47Q8BY87 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp47Q8BY87 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp47Q8BY87 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp47Q8BY87 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp47Q8BY87 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp47Q8BY87 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC20.06■□□□□ 0.8
Usp47Q8BY87 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp47Q8BY87 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC20.06■□□□□ 0.8
Usp47Q8BY87 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC20.06■□□□□ 0.8
Usp47Q8BY87 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC20.06■□□□□ 0.8
Usp47Q8BY87 AC131690.1-201ENSMUST00000218406 374 ntBASIC20.06■□□□□ 0.8
Usp47Q8BY87 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp47Q8BY87 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp47Q8BY87 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp47Q8BY87 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp47Q8BY87 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Nupl1-207ENSMUST00000225311 2475 ntBASIC20.05■□□□□ 0.8
Usp47Q8BY87 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Usp47Q8BY87 AC166574.6-201ENSMUST00000227889 1806 ntBASIC20.05■□□□□ 0.8
Usp47Q8BY87 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC20.05■□□□□ 0.8
Usp47Q8BY87 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp47Q8BY87 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Usp47Q8BY87 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Usp47Q8BY87 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp47Q8BY87 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp47Q8BY87 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Usp47Q8BY87 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp47Q8BY87 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Usp47Q8BY87 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp47Q8BY87 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp47Q8BY87 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC20.04■□□□□ 0.8
Usp47Q8BY87 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Usp47Q8BY87 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp47Q8BY87 Gm4971-201ENSMUST00000205991 1108 ntBASIC20.04■□□□□ 0.8
Usp47Q8BY87 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp47Q8BY87 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp47Q8BY87 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp47Q8BY87 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp47Q8BY87 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Usp47Q8BY87 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp47Q8BY87 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp47Q8BY87 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp47Q8BY87 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp47Q8BY87 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Usp47Q8BY87 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp47Q8BY87 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC20.03■□□□□ 0.8
Usp47Q8BY87 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Usp47Q8BY87 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp47Q8BY87 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp47Q8BY87 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Usp47Q8BY87 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Usp47Q8BY87 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
Usp47Q8BY87 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Usp47Q8BY87 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC20.03■□□□□ 0.8
Usp47Q8BY87 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Usp47Q8BY87 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp47Q8BY87 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Usp47Q8BY87 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp47Q8BY87 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Usp47Q8BY87 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp47Q8BY87 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp47Q8BY87 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp47Q8BY87 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Usp47Q8BY87 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Usp47Q8BY87 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Usp47Q8BY87 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Usp47Q8BY87 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC20.02■□□□□ 0.8
Usp47Q8BY87 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Usp47Q8BY87 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp47Q8BY87 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Usp47Q8BY87 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms