Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Usp40Q8BWR4 Gm38037-201ENSMUST00000192600 1624 ntBASIC19.49■□□□□ 0.71
Usp40Q8BWR4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Usp40Q8BWR4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Usp40Q8BWR4 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Usp40Q8BWR4 AC121801.1-201ENSMUST00000225363 1899 ntBASIC19.49■□□□□ 0.71
Usp40Q8BWR4 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp40Q8BWR4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp40Q8BWR4 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC19.49■□□□□ 0.71
Usp40Q8BWR4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp40Q8BWR4 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp40Q8BWR4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp40Q8BWR4 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp40Q8BWR4 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC19.48■□□□□ 0.71
Usp40Q8BWR4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Usp40Q8BWR4 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC19.48■□□□□ 0.71
Usp40Q8BWR4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Usp40Q8BWR4 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC19.48■□□□□ 0.71
Usp40Q8BWR4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp40Q8BWR4 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp40Q8BWR4 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp40Q8BWR4 Gm13385-201ENSMUST00000121089 220 ntBASIC19.48■□□□□ 0.71
Usp40Q8BWR4 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC19.48■□□□□ 0.71
Usp40Q8BWR4 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Usp40Q8BWR4 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC19.48■□□□□ 0.71
Usp40Q8BWR4 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC19.48■□□□□ 0.71
Usp40Q8BWR4 Gm37748-201ENSMUST00000194379 1140 ntBASIC19.48■□□□□ 0.71
Usp40Q8BWR4 Gm18307-201ENSMUST00000206864 949 ntBASIC19.48■□□□□ 0.71
Usp40Q8BWR4 Gm5035-201ENSMUST00000215581 927 ntBASIC19.48■□□□□ 0.71
Usp40Q8BWR4 Gm7446-201ENSMUST00000221035 1240 ntBASIC19.48■□□□□ 0.71
Usp40Q8BWR4 AC149294.4-201ENSMUST00000227870 882 ntBASIC19.48■□□□□ 0.71
Usp40Q8BWR4 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Usp40Q8BWR4 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp40Q8BWR4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Usp40Q8BWR4 Gm43509-201ENSMUST00000196551 2594 ntBASIC19.48■□□□□ 0.71
Usp40Q8BWR4 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Usp40Q8BWR4 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Usp40Q8BWR4 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp40Q8BWR4 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Usp40Q8BWR4 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Usp40Q8BWR4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Usp40Q8BWR4 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp40Q8BWR4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Usp40Q8BWR4 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp40Q8BWR4 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Usp40Q8BWR4 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp40Q8BWR4 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp40Q8BWR4 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Usp40Q8BWR4 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC19.47■□□□□ 0.71
Usp40Q8BWR4 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Usp40Q8BWR4 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp40Q8BWR4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp40Q8BWR4 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC19.47■□□□□ 0.71
Usp40Q8BWR4 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC19.47■□□□□ 0.71
Usp40Q8BWR4 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp40Q8BWR4 AC150560.1-201ENSMUST00000227731 1187 ntBASIC19.47■□□□□ 0.71
Usp40Q8BWR4 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp40Q8BWR4 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp40Q8BWR4 Gm8131-201ENSMUST00000213783 1570 ntBASIC19.47■□□□□ 0.71
Usp40Q8BWR4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Usp40Q8BWR4 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp40Q8BWR4 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp40Q8BWR4 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Gm11557-201ENSMUST00000120200 1008 ntBASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Gm9002-201ENSMUST00000178437 499 ntBASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Gm8927-201ENSMUST00000181978 981 ntBASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Gm43094-201ENSMUST00000196549 921 ntBASIC19.46■□□□□ 0.71
Usp40Q8BWR4 AC155258.1-201ENSMUST00000219303 253 ntBASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Gm3222-201ENSMUST00000071282 990 ntBASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 AC159196.2-201ENSMUST00000224082 1622 ntBASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp40Q8BWR4 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms