Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpne3Q8BT60 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Gm14042-201ENSMUST00000120139 833 ntBASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Gm17968-201ENSMUST00000194902 784 ntBASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Gm45098-201ENSMUST00000207179 657 ntBASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Gm45747-201ENSMUST00000212203 999 ntBASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Gm5364-201ENSMUST00000216789 889 ntBASIC13.8□□□□□ -0.2
Cpne3Q8BT60 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpne3Q8BT60 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Gm12260-201ENSMUST00000122447 411 ntBASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cpne3Q8BT60 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cpne3Q8BT60 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpne3Q8BT60 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpne3Q8BT60 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cpne3Q8BT60 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms