Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col16a1Q8BLX7 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC18.4■□□□□ 0.54
Col16a1Q8BLX7 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col16a1Q8BLX7 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col16a1Q8BLX7 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col16a1Q8BLX7 Mir698-201ENSMUST00000102164 109 ntBASIC18.4■□□□□ 0.54
Col16a1Q8BLX7 Gm1335-201ENSMUST00000121653 386 ntBASIC18.4■□□□□ 0.54
Col16a1Q8BLX7 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC18.4■□□□□ 0.54
Col16a1Q8BLX7 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC18.4■□□□□ 0.54
Col16a1Q8BLX7 Gm5161-201ENSMUST00000075243 853 ntBASIC18.4■□□□□ 0.54
Col16a1Q8BLX7 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col16a1Q8BLX7 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC18.4■□□□□ 0.54
Col16a1Q8BLX7 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col16a1Q8BLX7 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col16a1Q8BLX7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col16a1Q8BLX7 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.4■□□□□ 0.54
Col16a1Q8BLX7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col16a1Q8BLX7 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col16a1Q8BLX7 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Col16a1Q8BLX7 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Col16a1Q8BLX7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Col16a1Q8BLX7 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Col16a1Q8BLX7 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Col16a1Q8BLX7 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col16a1Q8BLX7 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC18.39■□□□□ 0.53
Col16a1Q8BLX7 Gm37259-201ENSMUST00000193903 849 ntBASIC18.39■□□□□ 0.53
Col16a1Q8BLX7 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC18.39■□□□□ 0.53
Col16a1Q8BLX7 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC18.39■□□□□ 0.53
Col16a1Q8BLX7 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col16a1Q8BLX7 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col16a1Q8BLX7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col16a1Q8BLX7 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col16a1Q8BLX7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col16a1Q8BLX7 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col16a1Q8BLX7 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col16a1Q8BLX7 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC18.39■□□□□ 0.53
Col16a1Q8BLX7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col16a1Q8BLX7 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col16a1Q8BLX7 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col16a1Q8BLX7 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col16a1Q8BLX7 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col16a1Q8BLX7 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC18.39■□□□□ 0.53
Col16a1Q8BLX7 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Rn7s1-201ENSMUST00000174924 300 ntBASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Rn7s2-201ENSMUST00000175032 300 ntBASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Gm26461-201ENSMUST00000175064 290 ntBASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Gm24447-201ENSMUST00000083977 338 ntBASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Gm42929-201ENSMUST00000198374 1286 ntBASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Gm17870-201ENSMUST00000219489 1174 ntBASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Cts7-204ENSMUST00000225321 1257 ntBASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col16a1Q8BLX7 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col16a1Q8BLX7 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col16a1Q8BLX7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col16a1Q8BLX7 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col16a1Q8BLX7 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col16a1Q8BLX7 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col16a1Q8BLX7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.37■□□□□ 0.53
Col16a1Q8BLX7 Gm13730-201ENSMUST00000121036 1462 ntBASIC18.37■□□□□ 0.53
Col16a1Q8BLX7 Gm12846-201ENSMUST00000120431 1373 ntBASIC18.37■□□□□ 0.53
Col16a1Q8BLX7 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col16a1Q8BLX7 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Col16a1Q8BLX7 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC18.37■□□□□ 0.53
Col16a1Q8BLX7 Gm38266-201ENSMUST00000194931 421 ntBASIC18.37■□□□□ 0.53
Col16a1Q8BLX7 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col16a1Q8BLX7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col16a1Q8BLX7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms