Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC19.95■□□□□ 0.78
Usp54Q8BL06 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp54Q8BL06 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp54Q8BL06 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp54Q8BL06 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp54Q8BL06 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp54Q8BL06 Gm5620-201ENSMUST00000077991 1348 ntBASIC19.95■□□□□ 0.78
Usp54Q8BL06 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp54Q8BL06 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp54Q8BL06 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
Usp54Q8BL06 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp54Q8BL06 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Usp54Q8BL06 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp54Q8BL06 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp54Q8BL06 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Usp54Q8BL06 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Usp54Q8BL06 Gm42550-201ENSMUST00000201553 960 ntBASIC19.95■□□□□ 0.78
Usp54Q8BL06 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC19.95■□□□□ 0.78
Usp54Q8BL06 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp54Q8BL06 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp54Q8BL06 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp54Q8BL06 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp54Q8BL06 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp54Q8BL06 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp54Q8BL06 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp54Q8BL06 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Usp54Q8BL06 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp54Q8BL06 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp54Q8BL06 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp54Q8BL06 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Usp54Q8BL06 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp54Q8BL06 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp54Q8BL06 Gm1335-201ENSMUST00000121653 386 ntBASIC19.94■□□□□ 0.78
Usp54Q8BL06 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC19.94■□□□□ 0.78
Usp54Q8BL06 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Usp54Q8BL06 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Usp54Q8BL06 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC19.94■□□□□ 0.78
Usp54Q8BL06 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC19.94■□□□□ 0.78
Usp54Q8BL06 Gm19309-201ENSMUST00000218295 205 ntBASIC19.94■□□□□ 0.78
Usp54Q8BL06 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp54Q8BL06 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp54Q8BL06 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp54Q8BL06 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp54Q8BL06 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp54Q8BL06 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
Usp54Q8BL06 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC19.94■□□□□ 0.78
Usp54Q8BL06 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp54Q8BL06 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Usp54Q8BL06 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp54Q8BL06 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp54Q8BL06 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp54Q8BL06 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp54Q8BL06 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp54Q8BL06 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp54Q8BL06 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp54Q8BL06 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp54Q8BL06 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp54Q8BL06 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC19.93■□□□□ 0.78
Usp54Q8BL06 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp54Q8BL06 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp54Q8BL06 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp54Q8BL06 Gm12329-201ENSMUST00000120829 1007 ntBASIC19.93■□□□□ 0.78
Usp54Q8BL06 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC19.93■□□□□ 0.78
Usp54Q8BL06 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC19.93■□□□□ 0.78
Usp54Q8BL06 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp54Q8BL06 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp54Q8BL06 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp54Q8BL06 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp54Q8BL06 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp54Q8BL06 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC19.93■□□□□ 0.78
Usp54Q8BL06 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp54Q8BL06 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp54Q8BL06 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Usp54Q8BL06 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp54Q8BL06 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC19.93■□□□□ 0.78
Usp54Q8BL06 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp54Q8BL06 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usp54Q8BL06 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usp54Q8BL06 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp54Q8BL06 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp54Q8BL06 Gm44981-201ENSMUST00000205549 1943 ntBASIC19.92■□□□□ 0.78
Usp54Q8BL06 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Usp54Q8BL06 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC19.92■□□□□ 0.78
Usp54Q8BL06 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Usp54Q8BL06 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp54Q8BL06 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC19.92■□□□□ 0.78
Usp54Q8BL06 AC133598.1-201ENSMUST00000224327 660 ntBASIC19.92■□□□□ 0.78
Usp54Q8BL06 Itm2b-204ENSMUST00000228637 783 ntBASIC19.92■□□□□ 0.78
Usp54Q8BL06 AC154276.1-201ENSMUST00000228874 1299 ntBASIC19.92■□□□□ 0.78
Usp54Q8BL06 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Usp54Q8BL06 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Usp54Q8BL06 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp54Q8BL06 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Usp54Q8BL06 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp54Q8BL06 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp54Q8BL06 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp54Q8BL06 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp54Q8BL06 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp54Q8BL06 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usp54Q8BL06 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms