Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Acot6-202ENSMUST00000222921 3622 ntBASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp2bQ8BJF9 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Gm12350-201ENSMUST00000121208 462 ntBASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Thap2-203ENSMUST00000218989 527 ntBASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp2bQ8BJF9 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 Gm5177-201ENSMUST00000183092 997 ntBASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp2bQ8BJF9 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Gm18195-201ENSMUST00000207604 706 ntBASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Gm9182-201ENSMUST00000217829 639 ntBASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms