Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SynbQ8BI41 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynbQ8BI41 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynbQ8BI41 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynbQ8BI41 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynbQ8BI41 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynbQ8BI41 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynbQ8BI41 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SynbQ8BI41 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SynbQ8BI41 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SynbQ8BI41 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SynbQ8BI41 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SynbQ8BI41 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynbQ8BI41 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynbQ8BI41 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.67□□□□□ -0.22
SynbQ8BI41 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.67□□□□□ -0.22
SynbQ8BI41 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SynbQ8BI41 Gm14719-201ENSMUST00000121891 340 ntBASIC13.67□□□□□ -0.22
SynbQ8BI41 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.67□□□□□ -0.22
SynbQ8BI41 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynbQ8BI41 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynbQ8BI41 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SynbQ8BI41 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SynbQ8BI41 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynbQ8BI41 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
SynbQ8BI41 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SynbQ8BI41 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynbQ8BI41 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynbQ8BI41 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynbQ8BI41 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SynbQ8BI41 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynbQ8BI41 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynbQ8BI41 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SynbQ8BI41 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.66□□□□□ -0.22
SynbQ8BI41 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SynbQ8BI41 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynbQ8BI41 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynbQ8BI41 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynbQ8BI41 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynbQ8BI41 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SynbQ8BI41 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynbQ8BI41 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.66□□□□□ -0.22
SynbQ8BI41 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynbQ8BI41 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.66□□□□□ -0.22
SynbQ8BI41 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynbQ8BI41 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynbQ8BI41 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynbQ8BI41 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.66□□□□□ -0.22
SynbQ8BI41 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynbQ8BI41 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
SynbQ8BI41 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynbQ8BI41 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.66□□□□□ -0.22
SynbQ8BI41 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SynbQ8BI41 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynbQ8BI41 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynbQ8BI41 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynbQ8BI41 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynbQ8BI41 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SynbQ8BI41 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynbQ8BI41 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynbQ8BI41 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.66□□□□□ -0.22
SynbQ8BI41 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.66□□□□□ -0.22
SynbQ8BI41 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SynbQ8BI41 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SynbQ8BI41 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SynbQ8BI41 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SynbQ8BI41 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SynbQ8BI41 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.65□□□□□ -0.22
SynbQ8BI41 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SynbQ8BI41 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
SynbQ8BI41 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SynbQ8BI41 Gm27533-201ENSMUST00000183800 152 ntBASIC13.65□□□□□ -0.22
SynbQ8BI41 Gm27838-201ENSMUST00000184829 128 ntBASIC13.65□□□□□ -0.22
SynbQ8BI41 Gm44344-201ENSMUST00000200287 129 ntBASIC13.65□□□□□ -0.22
SynbQ8BI41 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SynbQ8BI41 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SynbQ8BI41 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
SynbQ8BI41 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.65□□□□□ -0.22
SynbQ8BI41 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.65□□□□□ -0.22
SynbQ8BI41 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SynbQ8BI41 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.65□□□□□ -0.22
SynbQ8BI41 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SynbQ8BI41 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
SynbQ8BI41 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SynbQ8BI41 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
SynbQ8BI41 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
SynbQ8BI41 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SynbQ8BI41 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.64□□□□□ -0.23
SynbQ8BI41 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SynbQ8BI41 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.64□□□□□ -0.23
SynbQ8BI41 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SynbQ8BI41 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SynbQ8BI41 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SynbQ8BI41 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.64□□□□□ -0.23
SynbQ8BI41 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SynbQ8BI41 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
SynbQ8BI41 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SynbQ8BI41 Gm15487-201ENSMUST00000122373 465 ntBASIC13.64□□□□□ -0.23
SynbQ8BI41 Gm16215-201ENSMUST00000161990 637 ntBASIC13.64□□□□□ -0.23
SynbQ8BI41 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms