Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn3Q8BHH8 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.44□□□□□ -0.26
Clrn3Q8BHH8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn3Q8BHH8 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn3Q8BHH8 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn3Q8BHH8 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Clrn3Q8BHH8 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn3Q8BHH8 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn3Q8BHH8 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn3Q8BHH8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn3Q8BHH8 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Gm25911-201ENSMUST00000157621 56 ntBASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Gm27920-201ENSMUST00000183953 96 ntBASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn3Q8BHH8 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Gm14042-201ENSMUST00000120139 833 ntBASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Gm15483-201ENSMUST00000120338 456 ntBASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Gm24513-201ENSMUST00000174964 138 ntBASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Gm27397-201ENSMUST00000184997 107 ntBASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Clrn3Q8BHH8 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clrn3Q8BHH8 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms