Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Samm50Q8BGH2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Samm50Q8BGH2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Samm50Q8BGH2 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Samm50Q8BGH2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.76■□□□□ 0.27
Samm50Q8BGH2 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.76■□□□□ 0.27
Samm50Q8BGH2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.76■□□□□ 0.27
Samm50Q8BGH2 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Samm50Q8BGH2 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Samm50Q8BGH2 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Samm50Q8BGH2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Samm50Q8BGH2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Samm50Q8BGH2 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.76■□□□□ 0.27
Samm50Q8BGH2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Samm50Q8BGH2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Samm50Q8BGH2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.76■□□□□ 0.27
Samm50Q8BGH2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.76■□□□□ 0.27
Samm50Q8BGH2 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Samm50Q8BGH2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Samm50Q8BGH2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Samm50Q8BGH2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Samm50Q8BGH2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Samm50Q8BGH2 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Samm50Q8BGH2 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.76■□□□□ 0.27
Samm50Q8BGH2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Samm50Q8BGH2 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.76■□□□□ 0.27
Samm50Q8BGH2 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.76■□□□□ 0.27
Samm50Q8BGH2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Samm50Q8BGH2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Gm13365-201ENSMUST00000121188 973 ntBASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Gm16026-204ENSMUST00000162652 683 ntBASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Samm50Q8BGH2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Samm50Q8BGH2 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.74■□□□□ 0.27
Samm50Q8BGH2 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Samm50Q8BGH2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Samm50Q8BGH2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Samm50Q8BGH2 Gm14701-201ENSMUST00000117156 348 ntBASIC16.74■□□□□ 0.27
Samm50Q8BGH2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.74■□□□□ 0.27
Samm50Q8BGH2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Samm50Q8BGH2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Samm50Q8BGH2 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.74■□□□□ 0.27
Samm50Q8BGH2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Samm50Q8BGH2 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Samm50Q8BGH2 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Samm50Q8BGH2 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.74■□□□□ 0.27
Samm50Q8BGH2 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Samm50Q8BGH2 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Samm50Q8BGH2 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.74■□□□□ 0.27
Samm50Q8BGH2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Samm50Q8BGH2 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Samm50Q8BGH2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Samm50Q8BGH2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Samm50Q8BGH2 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Samm50Q8BGH2 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Samm50Q8BGH2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Samm50Q8BGH2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.73■□□□□ 0.27
Samm50Q8BGH2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Samm50Q8BGH2 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Samm50Q8BGH2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Samm50Q8BGH2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Samm50Q8BGH2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Samm50Q8BGH2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Samm50Q8BGH2 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.73■□□□□ 0.27
Samm50Q8BGH2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.73■□□□□ 0.27
Samm50Q8BGH2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.73■□□□□ 0.27
Samm50Q8BGH2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Samm50Q8BGH2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Samm50Q8BGH2 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Samm50Q8BGH2 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Samm50Q8BGH2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Samm50Q8BGH2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Samm50Q8BGH2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Samm50Q8BGH2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Samm50Q8BGH2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Samm50Q8BGH2 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Samm50Q8BGH2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms