Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Gm13616-201ENSMUST00000120600 222 ntBASIC14.1□□□□□ -0.15
Ubp1Q811S7 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Gm23547-201ENSMUST00000158210 271 ntBASIC14.1□□□□□ -0.15
Ubp1Q811S7 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Gm28196-201ENSMUST00000187719 640 ntBASIC14.1□□□□□ -0.15
Ubp1Q811S7 Gm18766-201ENSMUST00000189811 808 ntBASIC14.1□□□□□ -0.15
Ubp1Q811S7 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubp1Q811S7 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubp1Q811S7 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Gm37744-201ENSMUST00000194616 1590 ntBASIC14.09□□□□□ -0.15
Ubp1Q811S7 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Gm6415-201ENSMUST00000118488 348 ntBASIC14.09□□□□□ -0.15
Ubp1Q811S7 Gm13823-201ENSMUST00000119930 345 ntBASIC14.09□□□□□ -0.15
Ubp1Q811S7 Gm14042-201ENSMUST00000120139 833 ntBASIC14.09□□□□□ -0.15
Ubp1Q811S7 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.09□□□□□ -0.15
Ubp1Q811S7 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubp1Q811S7 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ubp1Q811S7 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ubp1Q811S7 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ubp1Q811S7 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ubp1Q811S7 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ubp1Q811S7 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm29310-201ENSMUST00000185468 696 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm21825-201ENSMUST00000185728 696 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm29109-201ENSMUST00000185895 696 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm21896-201ENSMUST00000186520 696 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm21873-201ENSMUST00000186728 696 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm21794-201ENSMUST00000187056 696 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm21880-201ENSMUST00000187275 696 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm21826-201ENSMUST00000187451 696 ntBASIC14.08□□□□□ -0.16
Ubp1Q811S7 Gm21198-201ENSMUST00000188393 696 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms