Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Upk3bQ80YF6 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Upk3bQ80YF6 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Gm16026-204ENSMUST00000162652 683 ntBASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Gm34391-201ENSMUST00000203706 907 ntBASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3bQ80YF6 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Gm7153-201ENSMUST00000117092 455 ntBASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Gm45098-201ENSMUST00000207179 657 ntBASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Gm10154-201ENSMUST00000084445 354 ntBASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3bQ80YF6 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Upk3bQ80YF6 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms