Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Gm15806-201ENSMUST00000120696 955 ntBASIC16.47■□□□□ 0.23
Prpf40bQ80W14 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf40bQ80W14 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Prpf40bQ80W14 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf40bQ80W14 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Prpf40bQ80W14 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf40bQ80W14 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf40bQ80W14 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf40bQ80W14 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.45■□□□□ 0.22
Prpf40bQ80W14 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf40bQ80W14 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf40bQ80W14 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.45■□□□□ 0.22
Prpf40bQ80W14 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.45■□□□□ 0.22
Prpf40bQ80W14 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.45■□□□□ 0.22
Prpf40bQ80W14 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Prpf40bQ80W14 Gm18624-201ENSMUST00000220966 658 ntBASIC16.45■□□□□ 0.22
Prpf40bQ80W14 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Prpf40bQ80W14 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf40bQ80W14 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf40bQ80W14 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Prpf40bQ80W14 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf40bQ80W14 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf40bQ80W14 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf40bQ80W14 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf40bQ80W14 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf40bQ80W14 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf40bQ80W14 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf40bQ80W14 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Prpf40bQ80W14 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms