Protein–RNA interactions for Protein: Q80U95

Ube3c, Ubiquitin-protein ligase E3C, mousemouse

Predictions only

Length 1,083 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3cQ80U95 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube3cQ80U95 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.77■□□□□ 0.28
Ube3cQ80U95 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.77■□□□□ 0.28
Ube3cQ80U95 Gm5354-201ENSMUST00000182417 973 ntBASIC16.77■□□□□ 0.28
Ube3cQ80U95 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube3cQ80U95 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ube3cQ80U95 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ube3cQ80U95 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ube3cQ80U95 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Ube3cQ80U95 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ube3cQ80U95 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ube3cQ80U95 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ube3cQ80U95 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ube3cQ80U95 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Ube3cQ80U95 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ube3cQ80U95 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ube3cQ80U95 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ube3cQ80U95 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ube3cQ80U95 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ube3cQ80U95 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ube3cQ80U95 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ube3cQ80U95 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.77■□□□□ 0.27
Ube3cQ80U95 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.77■□□□□ 0.27
Ube3cQ80U95 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3cQ80U95 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.76■□□□□ 0.27
Ube3cQ80U95 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.76■□□□□ 0.27
Ube3cQ80U95 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3cQ80U95 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3cQ80U95 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3cQ80U95 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ube3cQ80U95 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3cQ80U95 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3cQ80U95 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3cQ80U95 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ube3cQ80U95 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3cQ80U95 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.76■□□□□ 0.27
Ube3cQ80U95 Gm12091-201ENSMUST00000146791 830 ntBASIC16.76■□□□□ 0.27
Ube3cQ80U95 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Ube3cQ80U95 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3cQ80U95 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.76■□□□□ 0.27
Ube3cQ80U95 Mir6392-201ENSMUST00000184924 108 ntBASIC16.76■□□□□ 0.27
Ube3cQ80U95 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3cQ80U95 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ube3cQ80U95 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ube3cQ80U95 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3cQ80U95 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3cQ80U95 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3cQ80U95 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.76■□□□□ 0.27
Ube3cQ80U95 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3cQ80U95 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ube3cQ80U95 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3cQ80U95 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.75■□□□□ 0.27
Ube3cQ80U95 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.75■□□□□ 0.27
Ube3cQ80U95 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3cQ80U95 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3cQ80U95 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.75■□□□□ 0.27
Ube3cQ80U95 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Gm5425-201ENSMUST00000214125 459 ntBASIC16.75■□□□□ 0.27
Ube3cQ80U95 Gm19220-201ENSMUST00000222682 803 ntBASIC16.75■□□□□ 0.27
Ube3cQ80U95 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ube3cQ80U95 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3cQ80U95 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3cQ80U95 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.74■□□□□ 0.27
Ube3cQ80U95 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ube3cQ80U95 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3cQ80U95 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3cQ80U95 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ube3cQ80U95 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.74■□□□□ 0.27
Ube3cQ80U95 Gm15678-201ENSMUST00000117573 960 ntBASIC16.74■□□□□ 0.27
Ube3cQ80U95 Gm12341-201ENSMUST00000119724 503 ntBASIC16.74■□□□□ 0.27
Ube3cQ80U95 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3cQ80U95 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ube3cQ80U95 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3cQ80U95 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ube3cQ80U95 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms