Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp8Q80U87 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.35□□□□□ -0.11
Usp8Q80U87 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.35□□□□□ -0.11
Usp8Q80U87 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Usp8Q80U87 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp8Q80U87 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Usp8Q80U87 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp8Q80U87 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp8Q80U87 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp8Q80U87 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Usp8Q80U87 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp8Q80U87 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp8Q80U87 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp8Q80U87 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp8Q80U87 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp8Q80U87 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp8Q80U87 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp8Q80U87 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp8Q80U87 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp8Q80U87 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp8Q80U87 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp8Q80U87 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp8Q80U87 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp8Q80U87 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp8Q80U87 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp8Q80U87 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Usp8Q80U87 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Usp8Q80U87 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp8Q80U87 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp8Q80U87 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Usp8Q80U87 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.34□□□□□ -0.11
Usp8Q80U87 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.34□□□□□ -0.11
Usp8Q80U87 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.34□□□□□ -0.11
Usp8Q80U87 Gm16026-204ENSMUST00000162652 683 ntBASIC14.34□□□□□ -0.11
Usp8Q80U87 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.34□□□□□ -0.11
Usp8Q80U87 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp8Q80U87 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp8Q80U87 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Usp8Q80U87 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp8Q80U87 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp8Q80U87 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp8Q80U87 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp8Q80U87 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp8Q80U87 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp8Q80U87 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp8Q80U87 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp8Q80U87 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.34□□□□□ -0.11
Usp8Q80U87 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp8Q80U87 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp8Q80U87 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp8Q80U87 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Usp8Q80U87 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp8Q80U87 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp8Q80U87 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp8Q80U87 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Usp8Q80U87 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp8Q80U87 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp8Q80U87 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp8Q80U87 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp8Q80U87 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp8Q80U87 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Usp8Q80U87 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp8Q80U87 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Usp8Q80U87 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Usp8Q80U87 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp8Q80U87 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp8Q80U87 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp8Q80U87 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.33□□□□□ -0.12
Usp8Q80U87 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp8Q80U87 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp8Q80U87 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Usp8Q80U87 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp8Q80U87 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp8Q80U87 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.33□□□□□ -0.12
Usp8Q80U87 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp8Q80U87 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp8Q80U87 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp8Q80U87 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp8Q80U87 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Usp8Q80U87 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp8Q80U87 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Usp8Q80U87 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp8Q80U87 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp8Q80U87 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp8Q80U87 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp8Q80U87 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp8Q80U87 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Usp8Q80U87 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp8Q80U87 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp8Q80U87 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.32□□□□□ -0.12
Usp8Q80U87 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp8Q80U87 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp8Q80U87 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp8Q80U87 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp8Q80U87 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp8Q80U87 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp8Q80U87 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp8Q80U87 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp8Q80U87 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp8Q80U87 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms