Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pif1Q80SX8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pif1Q80SX8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pif1Q80SX8 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pif1Q80SX8 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pif1Q80SX8 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pif1Q80SX8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pif1Q80SX8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pif1Q80SX8 Gm22189-201ENSMUST00000103822 86 ntBASIC13.2□□□□□ -0.3
Pif1Q80SX8 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pif1Q80SX8 Gm12091-201ENSMUST00000146791 830 ntBASIC13.2□□□□□ -0.3
Pif1Q80SX8 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pif1Q80SX8 Olfr286-202ENSMUST00000205305 969 ntBASIC13.2□□□□□ -0.3
Pif1Q80SX8 Gm45384-201ENSMUST00000210451 277 ntBASIC13.2□□□□□ -0.3
Pif1Q80SX8 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.2□□□□□ -0.3
Pif1Q80SX8 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.2□□□□□ -0.3
Pif1Q80SX8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pif1Q80SX8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pif1Q80SX8 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.2□□□□□ -0.3
Pif1Q80SX8 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pif1Q80SX8 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pif1Q80SX8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pif1Q80SX8 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pif1Q80SX8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pif1Q80SX8 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Pif1Q80SX8 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Pif1Q80SX8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pif1Q80SX8 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pif1Q80SX8 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Gm11478-201ENSMUST00000117851 599 ntBASIC13.19□□□□□ -0.3
Pif1Q80SX8 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.19□□□□□ -0.3
Pif1Q80SX8 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Gm37230-201ENSMUST00000194491 818 ntBASIC13.19□□□□□ -0.3
Pif1Q80SX8 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.19□□□□□ -0.3
Pif1Q80SX8 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Mir125a-201ENSMUST00000083545 68 ntBASIC13.19□□□□□ -0.3
Pif1Q80SX8 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Gm37057-201ENSMUST00000192624 1916 ntBASIC13.19□□□□□ -0.3
Pif1Q80SX8 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Pif1Q80SX8 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.18□□□□□ -0.3
Pif1Q80SX8 Gm11434-201ENSMUST00000122379 629 ntBASIC13.18□□□□□ -0.3
Pif1Q80SX8 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pif1Q80SX8 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.18□□□□□ -0.3
Pif1Q80SX8 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms