Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx55Q6ZPL9 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.14■□□□□ 0.17
Ddx55Q6ZPL9 AC126253.1-201ENSMUST00000227974 824 ntBASIC16.14■□□□□ 0.17
Ddx55Q6ZPL9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx55Q6ZPL9 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Ddx55Q6ZPL9 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ddx55Q6ZPL9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx55Q6ZPL9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx55Q6ZPL9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx55Q6ZPL9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx55Q6ZPL9 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx55Q6ZPL9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx55Q6ZPL9 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC16.14■□□□□ 0.17
Ddx55Q6ZPL9 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC16.14■□□□□ 0.17
Ddx55Q6ZPL9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx55Q6ZPL9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Gm12485-201ENSMUST00000119641 291 ntBASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Gm43179-201ENSMUST00000198797 275 ntBASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Gm38671-201ENSMUST00000200573 130 ntBASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx55Q6ZPL9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Gm24644-201ENSMUST00000157114 139 ntBASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Gm44397-201ENSMUST00000195950 113 ntBASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Gm9257-201ENSMUST00000221254 232 ntBASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Olfr582-201ENSMUST00000098212 960 ntBASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx55Q6ZPL9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Gm15371-201ENSMUST00000117057 784 ntBASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Gm5187-201ENSMUST00000117317 991 ntBASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC16.11■□□□□ 0.17
Ddx55Q6ZPL9 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms