Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rad54bQ6PFE3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rad54bQ6PFE3 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Rad54bQ6PFE3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rad54bQ6PFE3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.36□□□□□ -0.11
Rad54bQ6PFE3 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rad54bQ6PFE3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Rad54bQ6PFE3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rad54bQ6PFE3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rad54bQ6PFE3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rad54bQ6PFE3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rad54bQ6PFE3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rad54bQ6PFE3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Rad54bQ6PFE3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rad54bQ6PFE3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rad54bQ6PFE3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rad54bQ6PFE3 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rad54bQ6PFE3 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Gm44608-201ENSMUST00000206827 855 ntBASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rad54bQ6PFE3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Gm11543-201ENSMUST00000120758 370 ntBASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Gm44492-201ENSMUST00000197012 141 ntBASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rad54bQ6PFE3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rad54bQ6PFE3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Rad54bQ6PFE3 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rad54bQ6PFE3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rad54bQ6PFE3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rad54bQ6PFE3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rad54bQ6PFE3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rad54bQ6PFE3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rad54bQ6PFE3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rad54bQ6PFE3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rad54bQ6PFE3 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rad54bQ6PFE3 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rad54bQ6PFE3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.33□□□□□ -0.12
Rad54bQ6PFE3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rad54bQ6PFE3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Rad54bQ6PFE3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.33□□□□□ -0.12
Rad54bQ6PFE3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.33□□□□□ -0.12
Rad54bQ6PFE3 Gm9727-201ENSMUST00000161387 555 ntBASIC14.33□□□□□ -0.12
Rad54bQ6PFE3 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms