Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Gm37714-201ENSMUST00000194742 342 ntBASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Gm19078-201ENSMUST00000206311 727 ntBASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Gm7561-201ENSMUST00000211203 886 ntBASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snrnp40Q6PE01 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Gm11524-201ENSMUST00000119349 807 ntBASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Gm6091-201ENSMUST00000098307 165 ntBASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snrnp40Q6PE01 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Snrnp40Q6PE01 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms