Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ShbQ6PD21 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ShbQ6PD21 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
ShbQ6PD21 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ShbQ6PD21 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
ShbQ6PD21 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
ShbQ6PD21 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ShbQ6PD21 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ShbQ6PD21 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShbQ6PD21 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.2■□□□□ 0.02
ShbQ6PD21 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ShbQ6PD21 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShbQ6PD21 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShbQ6PD21 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ShbQ6PD21 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShbQ6PD21 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ShbQ6PD21 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ShbQ6PD21 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ShbQ6PD21 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC15.2■□□□□ 0.02
ShbQ6PD21 Gm27341-201ENSMUST00000183570 106 ntBASIC15.2■□□□□ 0.02
ShbQ6PD21 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.2■□□□□ 0.02
ShbQ6PD21 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC15.2■□□□□ 0.02
ShbQ6PD21 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShbQ6PD21 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.2■□□□□ 0.02
ShbQ6PD21 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
ShbQ6PD21 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShbQ6PD21 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShbQ6PD21 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShbQ6PD21 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShbQ6PD21 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
ShbQ6PD21 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ShbQ6PD21 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
ShbQ6PD21 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.2■□□□□ 0.02
ShbQ6PD21 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ShbQ6PD21 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ShbQ6PD21 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShbQ6PD21 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShbQ6PD21 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShbQ6PD21 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShbQ6PD21 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShbQ6PD21 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.19■□□□□ 0.02
ShbQ6PD21 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShbQ6PD21 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShbQ6PD21 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShbQ6PD21 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC15.19■□□□□ 0.02
ShbQ6PD21 Gm16379-201ENSMUST00000161469 348 ntBASIC15.19■□□□□ 0.02
ShbQ6PD21 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShbQ6PD21 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC15.19■□□□□ 0.02
ShbQ6PD21 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC15.19■□□□□ 0.02
ShbQ6PD21 Gm6222-202ENSMUST00000182143 629 ntBASIC15.19■□□□□ 0.02
ShbQ6PD21 Gm8762-201ENSMUST00000193486 339 ntBASIC15.19■□□□□ 0.02
ShbQ6PD21 Gm37922-201ENSMUST00000195596 455 ntBASIC15.19■□□□□ 0.02
ShbQ6PD21 Rps4l-202ENSMUST00000204242 789 ntBASIC15.19■□□□□ 0.02
ShbQ6PD21 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShbQ6PD21 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShbQ6PD21 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShbQ6PD21 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShbQ6PD21 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShbQ6PD21 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
ShbQ6PD21 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShbQ6PD21 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ShbQ6PD21 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShbQ6PD21 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShbQ6PD21 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShbQ6PD21 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShbQ6PD21 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShbQ6PD21 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShbQ6PD21 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShbQ6PD21 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShbQ6PD21 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShbQ6PD21 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShbQ6PD21 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.18■□□□□ 0.02
ShbQ6PD21 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShbQ6PD21 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShbQ6PD21 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.18■□□□□ 0.02
ShbQ6PD21 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShbQ6PD21 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShbQ6PD21 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShbQ6PD21 Mir698-201ENSMUST00000102164 109 ntBASIC15.18■□□□□ 0.02
ShbQ6PD21 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.18■□□□□ 0.02
ShbQ6PD21 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.18■□□□□ 0.02
ShbQ6PD21 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ShbQ6PD21 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.18■□□□□ 0.02
ShbQ6PD21 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ShbQ6PD21 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ShbQ6PD21 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.18■□□□□ 0.02
ShbQ6PD21 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShbQ6PD21 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.18■□□□□ 0.02
ShbQ6PD21 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShbQ6PD21 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShbQ6PD21 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShbQ6PD21 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShbQ6PD21 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShbQ6PD21 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShbQ6PD21 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShbQ6PD21 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ShbQ6PD21 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShbQ6PD21 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ShbQ6PD21 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShbQ6PD21 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms