Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Shd-206ENSMUST00000225145 998 ntBASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgb4Q6P8W9 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Syt7-204ENSMUST00000223586 1344 ntBASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Gm13464-201ENSMUST00000119418 935 ntBASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hmgb4Q6P8W9 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb4Q6P8W9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Hmgb4Q6P8W9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Hmgb4Q6P8W9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Hmgb4Q6P8W9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms