Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.83■□□□□ 0.28
Ctr9Q62018 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.83■□□□□ 0.28
Ctr9Q62018 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.83■□□□□ 0.28
Ctr9Q62018 Gm6916-202ENSMUST00000205523 195 ntBASIC16.83■□□□□ 0.28
Ctr9Q62018 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.83■□□□□ 0.28
Ctr9Q62018 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.83■□□□□ 0.28
Ctr9Q62018 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.83■□□□□ 0.28
Ctr9Q62018 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ctr9Q62018 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ctr9Q62018 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ctr9Q62018 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ctr9Q62018 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ctr9Q62018 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ctr9Q62018 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ctr9Q62018 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ctr9Q62018 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ctr9Q62018 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ctr9Q62018 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Ctr9Q62018 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ctr9Q62018 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.83■□□□□ 0.28
Ctr9Q62018 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ctr9Q62018 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.82■□□□□ 0.28
Ctr9Q62018 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ctr9Q62018 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ctr9Q62018 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ctr9Q62018 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ctr9Q62018 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ctr9Q62018 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ctr9Q62018 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ctr9Q62018 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.82■□□□□ 0.28
Ctr9Q62018 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ctr9Q62018 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ctr9Q62018 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ctr9Q62018 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ctr9Q62018 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.82■□□□□ 0.28
Ctr9Q62018 Gm27838-201ENSMUST00000184829 128 ntBASIC16.82■□□□□ 0.28
Ctr9Q62018 Gm7063-201ENSMUST00000186840 981 ntBASIC16.82■□□□□ 0.28
Ctr9Q62018 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ctr9Q62018 Gm9229-201ENSMUST00000222777 126 ntBASIC16.82■□□□□ 0.28
Ctr9Q62018 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ctr9Q62018 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ctr9Q62018 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ctr9Q62018 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ctr9Q62018 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ctr9Q62018 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ctr9Q62018 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ctr9Q62018 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ctr9Q62018 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ctr9Q62018 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.82■□□□□ 0.28
Ctr9Q62018 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctr9Q62018 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctr9Q62018 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ctr9Q62018 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Ctr9Q62018 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ctr9Q62018 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctr9Q62018 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.81■□□□□ 0.28
Ctr9Q62018 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctr9Q62018 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ctr9Q62018 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ctr9Q62018 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.81■□□□□ 0.28
Ctr9Q62018 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ctr9Q62018 Gm3436-201ENSMUST00000179930 840 ntBASIC16.81■□□□□ 0.28
Ctr9Q62018 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.81■□□□□ 0.28
Ctr9Q62018 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.81■□□□□ 0.28
Ctr9Q62018 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.81■□□□□ 0.28
Ctr9Q62018 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ctr9Q62018 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ctr9Q62018 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctr9Q62018 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.81■□□□□ 0.28
Ctr9Q62018 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.81■□□□□ 0.28
Ctr9Q62018 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctr9Q62018 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctr9Q62018 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctr9Q62018 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ctr9Q62018 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctr9Q62018 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctr9Q62018 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctr9Q62018 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ctr9Q62018 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctr9Q62018 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctr9Q62018 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ctr9Q62018 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ctr9Q62018 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ctr9Q62018 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ctr9Q62018 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ctr9Q62018 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctr9Q62018 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctr9Q62018 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctr9Q62018 Syt7-204ENSMUST00000223586 1344 ntBASIC16.8■□□□□ 0.28
Ctr9Q62018 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ctr9Q62018 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ctr9Q62018 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.8■□□□□ 0.28
Ctr9Q62018 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctr9Q62018 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctr9Q62018 Gm29667-201ENSMUST00000190817 490 ntBASIC16.8■□□□□ 0.28
Ctr9Q62018 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.8■□□□□ 0.28
Ctr9Q62018 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctr9Q62018 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ctr9Q62018 Gm2423-201ENSMUST00000074863 733 ntBASIC16.8■□□□□ 0.28
Ctr9Q62018 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms