Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mre11Q61216 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mre11Q61216 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mre11Q61216 AC117194.1-201ENSMUST00000224847 3002 ntBASIC17.12■□□□□ 0.33
Mre11Q61216 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.12■□□□□ 0.33
Mre11Q61216 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mre11Q61216 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.12■□□□□ 0.33
Mre11Q61216 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC17.12■□□□□ 0.33
Mre11Q61216 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.12■□□□□ 0.33
Mre11Q61216 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.12■□□□□ 0.33
Mre11Q61216 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mre11Q61216 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mre11Q61216 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.12■□□□□ 0.33
Mre11Q61216 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Mre11Q61216 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mre11Q61216 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mre11Q61216 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC17.12■□□□□ 0.33
Mre11Q61216 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mre11Q61216 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC17.12■□□□□ 0.33
Mre11Q61216 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mre11Q61216 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mre11Q61216 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mre11Q61216 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mre11Q61216 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.12■□□□□ 0.33
Mre11Q61216 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mre11Q61216 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mre11Q61216 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mre11Q61216 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mre11Q61216 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mre11Q61216 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Mre11Q61216 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mre11Q61216 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Mre11Q61216 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mre11Q61216 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mre11Q61216 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.11■□□□□ 0.33
Mre11Q61216 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mre11Q61216 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mre11Q61216 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Mre11Q61216 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Mre11Q61216 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mre11Q61216 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mre11Q61216 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Mre11Q61216 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Mre11Q61216 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mre11Q61216 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Mre11Q61216 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Mre11Q61216 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Mre11Q61216 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.11■□□□□ 0.33
Mre11Q61216 Gm5587-201ENSMUST00000206270 674 ntBASIC17.11■□□□□ 0.33
Mre11Q61216 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.11■□□□□ 0.33
Mre11Q61216 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Mre11Q61216 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mre11Q61216 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mre11Q61216 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Mre11Q61216 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mre11Q61216 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mre11Q61216 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mre11Q61216 Gm42748-201ENSMUST00000199354 2341 ntBASIC17.11■□□□□ 0.33
Mre11Q61216 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Mre11Q61216 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Mre11Q61216 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
Mre11Q61216 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mre11Q61216 Gm10729-202ENSMUST00000193403 1375 ntBASIC17.11■□□□□ 0.33
Mre11Q61216 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mre11Q61216 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mre11Q61216 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Mre11Q61216 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mre11Q61216 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Mre11Q61216 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mre11Q61216 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mre11Q61216 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mre11Q61216 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mre11Q61216 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mre11Q61216 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mre11Q61216 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Mre11Q61216 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mre11Q61216 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mre11Q61216 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mre11Q61216 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Mre11Q61216 Ssr1-203ENSMUST00000225246 1825 ntBASIC17.1■□□□□ 0.33
Mre11Q61216 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC17.1■□□□□ 0.33
Mre11Q61216 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mre11Q61216 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mre11Q61216 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mre11Q61216 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.1■□□□□ 0.33
Mre11Q61216 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mre11Q61216 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mre11Q61216 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mre11Q61216 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mre11Q61216 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Mre11Q61216 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.1■□□□□ 0.33
Mre11Q61216 Olfr286-202ENSMUST00000205305 969 ntBASIC17.1■□□□□ 0.33
Mre11Q61216 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mre11Q61216 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mre11Q61216 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Mre11Q61216 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mre11Q61216 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mre11Q61216 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mre11Q61216 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Mre11Q61216 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms