Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NfkbibQ60778 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NfkbibQ60778 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NfkbibQ60778 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NfkbibQ60778 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NfkbibQ60778 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NfkbibQ60778 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NfkbibQ60778 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC17.11■□□□□ 0.33
NfkbibQ60778 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NfkbibQ60778 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC17.11■□□□□ 0.33
NfkbibQ60778 AC131690.1-201ENSMUST00000218406 374 ntBASIC17.11■□□□□ 0.33
NfkbibQ60778 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.11■□□□□ 0.33
NfkbibQ60778 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NfkbibQ60778 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NfkbibQ60778 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NfkbibQ60778 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NfkbibQ60778 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NfkbibQ60778 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NfkbibQ60778 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC17.11■□□□□ 0.33
NfkbibQ60778 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC17.11■□□□□ 0.33
NfkbibQ60778 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NfkbibQ60778 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NfkbibQ60778 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NfkbibQ60778 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NfkbibQ60778 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NfkbibQ60778 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NfkbibQ60778 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NfkbibQ60778 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NfkbibQ60778 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NfkbibQ60778 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NfkbibQ60778 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NfkbibQ60778 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NfkbibQ60778 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NfkbibQ60778 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NfkbibQ60778 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NfkbibQ60778 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NfkbibQ60778 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.1■□□□□ 0.33
NfkbibQ60778 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NfkbibQ60778 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NfkbibQ60778 Gm42612-201ENSMUST00000197986 623 ntBASIC17.1■□□□□ 0.33
NfkbibQ60778 Gm43170-201ENSMUST00000199827 612 ntBASIC17.1■□□□□ 0.33
NfkbibQ60778 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NfkbibQ60778 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC17.1■□□□□ 0.33
NfkbibQ60778 Gm9797-201ENSMUST00000052902 613 ntBASIC17.1■□□□□ 0.33
NfkbibQ60778 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NfkbibQ60778 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.1■□□□□ 0.33
NfkbibQ60778 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NfkbibQ60778 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NfkbibQ60778 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.1■□□□□ 0.33
NfkbibQ60778 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NfkbibQ60778 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NfkbibQ60778 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NfkbibQ60778 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NfkbibQ60778 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NfkbibQ60778 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NfkbibQ60778 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NfkbibQ60778 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
NfkbibQ60778 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NfkbibQ60778 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NfkbibQ60778 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NfkbibQ60778 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NfkbibQ60778 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC17.09■□□□□ 0.33
NfkbibQ60778 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NfkbibQ60778 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NfkbibQ60778 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NfkbibQ60778 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NfkbibQ60778 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
NfkbibQ60778 Gm9347-201ENSMUST00000211473 1607 ntBASIC17.09■□□□□ 0.33
NfkbibQ60778 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NfkbibQ60778 Gm38102-201ENSMUST00000192791 1935 ntBASIC17.09■□□□□ 0.33
NfkbibQ60778 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
NfkbibQ60778 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NfkbibQ60778 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NfkbibQ60778 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NfkbibQ60778 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.09■□□□□ 0.33
NfkbibQ60778 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NfkbibQ60778 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NfkbibQ60778 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NfkbibQ60778 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NfkbibQ60778 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NfkbibQ60778 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NfkbibQ60778 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NfkbibQ60778 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NfkbibQ60778 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NfkbibQ60778 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NfkbibQ60778 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
NfkbibQ60778 AC114543.1-201ENSMUST00000226451 1558 ntBASIC17.08■□□□□ 0.32
NfkbibQ60778 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NfkbibQ60778 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NfkbibQ60778 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NfkbibQ60778 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.08■□□□□ 0.32
NfkbibQ60778 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NfkbibQ60778 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NfkbibQ60778 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NfkbibQ60778 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC17.08■□□□□ 0.32
NfkbibQ60778 AC165157.4-201ENSMUST00000220587 139 ntBASIC17.08■□□□□ 0.32
NfkbibQ60778 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC17.08■□□□□ 0.32
NfkbibQ60778 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NfkbibQ60778 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NfkbibQ60778 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms