Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm2451-201ENSMUST00000199447 999 ntBASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm10290-201ENSMUST00000200451 999 ntBASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm18246-201ENSMUST00000221023 728 ntBASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm9182-201ENSMUST00000217829 639 ntBASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms