Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
Rnf20Q5DTM8 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf20Q5DTM8 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf20Q5DTM8 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf20Q5DTM8 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf20Q5DTM8 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf20Q5DTM8 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf20Q5DTM8 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf20Q5DTM8 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf20Q5DTM8 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf20Q5DTM8 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rnf20Q5DTM8 Gm6539-201ENSMUST00000119157 1064 ntBASIC17■□□□□ 0.31
Rnf20Q5DTM8 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17■□□□□ 0.31
Rnf20Q5DTM8 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf20Q5DTM8 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf20Q5DTM8 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Rnf20Q5DTM8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rnf20Q5DTM8 Gm8116-201ENSMUST00000182917 1201 ntBASIC17■□□□□ 0.31
Rnf20Q5DTM8 Gm2756-201ENSMUST00000195851 400 ntBASIC17■□□□□ 0.31
Rnf20Q5DTM8 Gm18049-201ENSMUST00000208909 581 ntBASIC17■□□□□ 0.31
Rnf20Q5DTM8 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf20Q5DTM8 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf20Q5DTM8 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf20Q5DTM8 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf20Q5DTM8 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rnf20Q5DTM8 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf20Q5DTM8 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf20Q5DTM8 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17■□□□□ 0.31
Rnf20Q5DTM8 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC17■□□□□ 0.31
Rnf20Q5DTM8 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf20Q5DTM8 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17■□□□□ 0.31
Rnf20Q5DTM8 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rnf20Q5DTM8 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gm14822-201ENSMUST00000122247 291 ntBASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gm29310-201ENSMUST00000185468 696 ntBASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gm21825-201ENSMUST00000185728 696 ntBASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gm29109-201ENSMUST00000185895 696 ntBASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gm21896-201ENSMUST00000186520 696 ntBASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gm21873-201ENSMUST00000186728 696 ntBASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gm21794-201ENSMUST00000187056 696 ntBASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gm21880-201ENSMUST00000187275 696 ntBASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gm21826-201ENSMUST00000187451 696 ntBASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gm21198-201ENSMUST00000188393 696 ntBASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gm21749-201ENSMUST00000189343 696 ntBASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gm21901-201ENSMUST00000189568 696 ntBASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gm29424-201ENSMUST00000189716 696 ntBASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gm28599-201ENSMUST00000189838 694 ntBASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gm21867-201ENSMUST00000189917 696 ntBASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gm29269-201ENSMUST00000190087 696 ntBASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gm21722-201ENSMUST00000190153 696 ntBASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gm28423-201ENSMUST00000190701 696 ntBASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gm21899-201ENSMUST00000190745 696 ntBASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gm21910-201ENSMUST00000191163 696 ntBASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gm21849-201ENSMUST00000191571 696 ntBASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gm28678-201ENSMUST00000191593 696 ntBASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gm20910-201ENSMUST00000193268 696 ntBASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gm21871-201ENSMUST00000194621 696 ntBASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Rnf20Q5DTM8 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf20Q5DTM8 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms