Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Scn2bQ56A07 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Gm27397-201ENSMUST00000184997 107 ntBASIC14.13□□□□□ -0.15
Scn2bQ56A07 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.13□□□□□ -0.15
Scn2bQ56A07 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn2bQ56A07 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.12□□□□□ -0.15
Scn2bQ56A07 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Gm45747-201ENSMUST00000212203 999 ntBASIC14.12□□□□□ -0.15
Scn2bQ56A07 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.12□□□□□ -0.15
Scn2bQ56A07 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn2bQ56A07 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
Scn2bQ56A07 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.11□□□□□ -0.15
Scn2bQ56A07 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.11□□□□□ -0.15
Scn2bQ56A07 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.11□□□□□ -0.15
Scn2bQ56A07 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn2bQ56A07 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Scn2bQ56A07 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Gm6736-201ENSMUST00000166583 948 ntBASIC14.11□□□□□ -0.15
Scn2bQ56A07 Gm24513-201ENSMUST00000174964 138 ntBASIC14.11□□□□□ -0.15
Scn2bQ56A07 Gm2756-201ENSMUST00000195851 400 ntBASIC14.11□□□□□ -0.15
Scn2bQ56A07 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.11□□□□□ -0.15
Scn2bQ56A07 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn2bQ56A07 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms